Fold library entry viewer: c3qf4B_

Added to library: Sat Mar 31 15:41:20 2012
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	P	I	L	E	K	P	A	L	K	N	P	T	A	T	L	R	R	L	L	G	Y	L	R	P	H	T	F	T	L	I	M	V	F	V	F	V	T	V	S	S	I	L	G	V	L	S	P	Y	L	I	G	K	T	I	D	V	V	F	V	P	R	R	F	D	L	L	P	R	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S					S										G	G	G	T	G	G	G																																T	T	T	T	T		G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	M	L	I	L	G	T	I	Y	A	L	T	S	L	L	F	W	L	Q	G	K	I	M	L	T	L	S	Q	D	V	V	F	R	L	R	K	E	L	F	E	K	L	Q	R	V	P	V	G	F	F	D	R	T	P	H	G	D	I	I	S	R	V	I	N	D	V	D	N	I	N	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																												S		T						S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	L	G	N	S	I	I	Q	F	F	S	G	I	V	T	L	A	G	A	V	I	M	M	F	R	V	N	V	I	L	S	L	V	T	L	S	I	V	P	L	T	V	L	I	T	Q	I	V	S	S	Q	T	R	K	Y	F	Y	E	N	Q	R	V	L	G	Q	L	N	G	I	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T																															T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	E	E	D	I	S	G	L	T	V	I	K	L	F	T	R	E	E	K	E	M	E	K	F	D	R	V	N	E	S	L	R	K	V	G	T	K	A	Q	I	F	S	G	V	L	P	P	L	M	N	M	V	N	N	L	G	F	A	L	I	S	G	F	G	G	W	L	A	L	K	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T							T	T																											T	T	T																								G	G	G	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	I	I	T	V	G	T	I	A	T	F	I	G	Y	S	R	Q	F	T	R	P	L	N	E	L	S	N	Q	F	N	M	I	Q	M	A	L	A	S	A	E	R	I	F	E	I	L	D	L	E	E	E	K	D	D	P	D	A	V	E	L	R	E	V	R	G	E	I	E	F	K	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S										T	T	T	T	S	S																												T	T	S							S	S						S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	V	W	F	S	Y	D	K	K	K	P	V	L	K	D	I	T	F	H	I	K	P	G	Q	K	V	A	L	V	G	P	T	G	S	G	K	T	T	I	V	N	L	L	M	R	F	Y	D	V	D	R	G	Q	I	L	V	D	G	I	D	I	R	K	I	K	R	S	S	L	R	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S	S	S	S		S			S							T	T									T	T	S	S	T	T							T	T	S	S			S							T	T			G	G	G	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	S	I	G	I	V	L	Q	D	T	I	L	F	S	T	T	V	K	E	N	L	K	Y	G	N	P	G	A	T	D	E	E	I	K	E	A	A	K	L	T	H	S	D	H	F	I	K	H	L	P	E	G	Y	E	T	V	L	T	D	N	G	E	D	L	S	Q	G	Q	R	Q	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T					S	S	B							S	S	S	T	T			T	T						T	T	T	T	T							T	S	T	T	G	G	G		B						T	T	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	L	A	I	T	R	A	F	L	A	N	P	K	I	L	I	L	D	E	A	T	S	N	V	D	T	K	T	E	K	S	I	Q	A	A	M	W	K	L	M	E	G	K	T	S	I	I	I	A	H	R	L	N	T	I	K	N	A	D	L	I	I	V	L	R	D	G	E	I	V	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T			S									T	T																		T	T	S						S			T	T						S							S	S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.
Sequence	M	G	K	H	D	E	L	I	Q	K	R	G	F	Y	Y	E	L	F	T	S	Q	Y	G	L	V	V	E	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S								T	T												G	G	G	G	G

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PDB structure

FASTA sequence

Hidden Markov model

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