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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3qeaZ_

Fold library idPDB HeaderMoleculeTitle
c3qeaZ_PDB header: hydrolase/dnaChain: Z: PDB Molecule: exonuclease 1;PDBTitle: crystal structure of human exonuclease 1 exo1 (wt) in complex with dna2 (complex ii)


Added to library: Sat Apr 23 09:03:09 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCMKFVNMLLSHGI
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Known secondary structure (DSSP)

TTTGGGGGGGTTSTTTT



TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence KPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFTRSINITHAMAHKVIKAARSQG
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Known secondary structure (DSSP)

S

TTSTTTT

TTGGG



TTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence VDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCKKVILKMDQFGNGLEIDQARLGMCRQLGDVFT
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Known secondary structure (DSSP)

SS
TTS
S
S
GGGGGGT
SS

TTSGGGGGG
TTTTTTTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence EEKFRYMCILSGCDYLSSLRGIGLAKACKVLRLANNPDIVKVIKKIGHYLKMNITVPEDYINGFIRANNT
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Known secondary structure (DSSP)
SSS


TT




S
TTTTS




 .........290.........300.........310.........320.........330.........340.....
Sequence FLYQLVFDPIKRKLIPLNAYEDDVDPETLSYAGQYVDDSIALQIALGNKDINTFEQIDDYNPDTA
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Known secondary structure (DSSP)
TTTTSS


TT

GGG
GGG




TT
B
TTT

B




SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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