PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3qc3B_

Fold library id	PDB Header	Molecule	Title
c3qc3B_	PDB header: isomerase	Chain: B: PDB Molecule: d-ribulose-5-phosphate-3-epimerase;	PDBTitle: crystal structure of a d-ribulose-5-phosphate-3-epimerase (np_954699)2 from homo sapiens at 2.20 a resolution

Links to external resources
Added to library: Sat Mar 12 08:44:21 2011

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G X A S G C K I G P S I L N S D L A N L G A E C L R X L D S G A D Y L H L D V X D G H F V P N I T F G H P V V E S L R K Q L G Q D P F F D X

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
T T S
G G G T T
S
B S S S S S
B
S S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence H X X V S K P E Q W V K P X A V A G A N Q Y T F H L E A T E N P G A L I K D I R E N G X K V G L A I K P G T S V E Y L A P W A N Q I D X A L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T
S G G G
S
T T
T T S
G G G G T T T G G G S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V X T V E P G F G G Q K F X E D X X P K V H W L R T Q F P S L D I E V D G G V G P D T V H K C A E A G A N X I V S G S A I X R S E D P R S V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
T T
S S
G G G
T T
S S
S T T T T
T
S

. . . . . . . . . 220 . . . . .

Sequence I N L L R N V C S E A A Q K R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	X	A	S	G	C	K	I	G	P	S	I	L	N	S	D	L	A	N	L	G	A	E	C	L	R	X	L	D	S	G	A	D	Y	L	H	L	D	V	X	D	G	H	F	V	P	N	I	T	F	G	H	P	V	V	E	S	L	R	K	Q	L	G	Q	D	P	F	F	D	X
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											B		T	T	S		G	G	G											T	T		S								B	S	S	S	S	S		B																S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	H	X	X	V	S	K	P	E	Q	W	V	K	P	X	A	V	A	G	A	N	Q	Y	T	F	H	L	E	A	T	E	N	P	G	A	L	I	K	D	I	R	E	N	G	X	K	V	G	L	A	I	K	P	G	T	S	V	E	Y	L	A	P	W	A	N	Q	I	D	X	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S													T		S						G	G	G		S												T	T									T	T	S		G	G	G	G	T	T	T	G	G	G	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	X	T	V	E	P	G	F	G	G	Q	K	F	X	E	D	X	X	P	K	V	H	W	L	R	T	Q	F	P	S	L	D	I	E	V	D	G	G	V	G	P	D	T	V	H	K	C	A	E	A	G	A	N	X	I	V	S	G	S	A	I	X	R	S	E	D	P	R	S	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S		T	T		S	S					G	G	G												T	T							S	S		S	T	T	T								T												T		S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Sequence	I	N	L	L	R	N	V	C	S	E	A	A	Q	K	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)