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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3qbuD_

Fold library idPDB HeaderMoleculeTitle
c3qbuD_PDB header: hydrolaseChain: D: PDB Molecule: putative uncharacterized protein;PDBTitle: crystal structure of putative peptidoglyacn deactelyase (hp0310) from2 helicobacter pylori


Added to library: Sat May 28 09:09:27 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AKEILVAYGVDIDAVAGWLGSYGGEDSPDDISRGLFAGEVGIPRLLKLFKKYHLPATWFVPGHSIETFPE
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Known secondary structure (DSSP)



TSS
TT
TTT





 .........80.........90.........100.........110.........120.........130.........140
Sequence QMKMIVDAGHEVGAHGYSHENPIAMSTKQEEDVLLKSVELIKDLTGKAPTGYVAPWWEFSNITNELLLKH
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Known secondary structure (DSSP) TTT
B

SS


GGGS
SS




GGG

SSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence GFKYDHSLMHNDFTPYYVRVGDSWSKIDYSLEAKDWMKPLIRGVETNLVEIPANWYLDDLPPMMFIKKSP
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Known secondary structure (DSSP) T





S
SSS


B




TTS
GGGT



B





GGGBS


TT
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence NSFGFVSPRDIGQMWIDQFDWVYREMDYAVFSMTIHPDVSARPQVLLMHEKIIEHINKHEGVRWVTFNEI
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Known secondary structure (DSSP) T



S

S
TSTTSTT

 .........290
Sequence ADDFLKRNPR
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Known secondary structure (DSSP) S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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