Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3q9tB_

Fold library idPDB HeaderMoleculeTitle
c3q9tB_PDB header: oxidoreductaseChain: B: PDB Molecule: choline dehydrogenase and related flavoproteins;PDBTitle: crystal structure analysis of formate oxidase


Added to library: Sat Sep 24 10:47:50 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ATDGSHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIGNPEDIPEITTPSSAMDLRNSKYDWAYKTT
Predicted secondary structure








































SS confidence





































































Known secondary structure (DSSP)

TT
S
STTSTTS

SS
S
GGG
SGGGGGGGTTSTTB

 .........80.........90.........100.........110.........120.........130.........140
Sequence MVRRDDYERIEKPNTRGKTLGGSSSLNYFTWVPGHKATFDQWEEFGGKEWTWDPLVPYLRKSATYHDDPR
Predicted secondary structure





































SS confidence





































































Known secondary structure (DSSP) TT

B
STTGGGGTS





TT
GGGSTT
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence LYSPELEKIGGGGPIPISHAELIDEMAPFRENLTKAWKSMGQPLIENIYDGEMDGLTHCCDTIYRGQRSG
Predicted secondary structure

















































SS confidence





































































Known secondary structure (DSSP)
S
GGGGGG

S
S



GGGTTT

B
S

SSS



STT

 .........220.........230.........240.........250.........260.........270.........280
Sequence SFLFVKNKPNITIVPEVHSKRLIINEADRTCKGVTVVTAAGNELNFFADREVILSQGVFETPKLLMLSGI
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP) GGGGSSS
TT
S
TTTT
TTS


TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence GPTRELSRHGINTIVDSRHVGQNLMDHPGVPFVLRVKDGFGMDDVLLRHGPKRDAVVSAYNKNRSGPVGS
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP)
TT


S
TTTTB


TTSSSTS
SS
SGGG
 .........360.........370.........380.........390.........400.........410.........420
Sequence GLLELVGFPRIDKYLEKDAEYRKAKAANGGKDPFSPLGQPHFELDFVCMFGTAFQWHFPTPKTGDHLTVV
Predicted secondary structure











































SS confidence





































































Known secondary structure (DSSP)
S


T
TTT

SS
TTS

SSS

GGG
TTS


SSS
 .........430.........440.........450.........460.........470.........480.........490
Sequence VDLVRPISDPGEVTLNSADPFQQPNINLNFFANDLDIIAMREGIRFSYDLLFKGEGFKDLVESEYPWEMP
Predicted secondary structure







































SS confidence





































































Known secondary structure (DSSP)
S

S


S
S
TTS



TT
STSTTGGGTSS


 .........500.........510.........520.........530.........540.........550.........560
Sequence LDSDKEMHRAVLDRCQTAFHPTGTARLSKNIDQGVVDPKLKVHGIKKLRVADASVIPIIPDCRIQNSVYA
Predicted secondary structure










































SS confidence





































































Known secondary structure (DSSP) TT


S

B
TT
B
SSTTT
SB
TTSBBTT
BS
SGGG
SS

SS

 .........570.......
Sequence VGEKCADMIKAEHKDLY
Predicted secondary structure



SS confidence
















Known secondary structure (DSSP)
TTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D