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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3q6kA_

Fold library idPDB HeaderMoleculeTitle
c3q6kA_PDB header: protein bindingChain: A: PDB Molecule: 43.2 kda salivary protein;PDBTitle: salivary protein from lutzomyia longipalpis


Added to library: Sat Jul 30 09:45:56 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ADTQGYKWKQLLYNNVTPGSYNPDNMISTAFAYDAEGEKLFLAVPRKLPRVPYTLAEVDTKNSLGVKGKH
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Known secondary structure (DSSP)


SS

BTTS
TTSS
GGG



TTTT

TTSTT
S
STT
TT
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence SPLLNKFSGHKTGKELTSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVR
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Known secondary structure (DSSP) S

B
TT
SSS
SSS

TT

SS
SS
STTGGGS




SSSTT

 .........150.........160.........170.........180.........190.........200.........210
Sequence YYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFD
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Known secondary structure (DSSP)

GGG


GGGS
TTTTS
STTTTTTTT
GGGS

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence YGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIAL
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Known secondary structure (DSSP) TT






TTS

SS
SSSTT






TT

 .........290.........300.........310.........320.........330.........340.........350
Sequence AYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMSNGFPPIRKS
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Known secondary structure (DSSP)
TTT
SSSSTTS
SB
GGG
TT

S
TTS

S

SSTTG
 .........360.........370.........380
Sequence EKFKYDFPRYRLMRIMDTQEAIAGTACDMN
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Known secondary structure (DSSP) GG


SS
SS
TTSTTS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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