PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c3q66A_

Fold library id	PDB Header	Molecule	Title
c3q66A_	PDB header: chaperone/transferase	Chain: A: PDB Molecule: vacuolar protein sorting-associated protein 75;	PDBTitle: structure of the vps75-rtt109 histone chaperone-lysine2 acetyltransferase complex (full-length proteins in space group p6122)

Links to external resources
Added to library: Wed Jan 9 22:20:14 2013

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M S D Q E N E N E H A K A F L G L A K C E E E V D A I E R E V E L Y R L N K M K P V Y E K R D A Y I D E I A E F W K I V L S Q H V S F A N Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T S T T
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence I R A S D F K Y I D T I D K I K V E W L A L E S E M Y D T R D F S I T F H F H G I E G D F K E Q Q V T K V F Q I K K G K D D Q E D G I L T S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
G G G T T G G G T
T T S
T T
B T T T B
T T
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence E P V P I E W P Q S Y D S I N P D L I K D K R S P E G K K K Y R Q G M K T I F G W F R W T G L K P G K E F P H G D S L A S L F S E E I Y P F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G G G G
T T T
S
S S S T S T T
S S S T T S S S T T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . .

Sequence C V K Y Y A E A Q R D L E D E E G E S G V D L P L S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S G G G T T

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	S	D	Q	E	N	E	N	E	H	A	K	A	F	L	G	L	A	K	C	E	E	E	V	D	A	I	E	R	E	V	E	L	Y	R	L	N	K	M	K	P	V	Y	E	K	R	D	A	Y	I	D	E	I	A	E	F	W	K	I	V	L	S	Q	H	V	S	F	A	N	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																																				T	S	T	T										T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	R	A	S	D	F	K	Y	I	D	T	I	D	K	I	K	V	E	W	L	A	L	E	S	E	M	Y	D	T	R	D	F	S	I	T	F	H	F	H	G	I	E	G	D	F	K	E	Q	Q	V	T	K	V	F	Q	I	K	K	G	K	D	D	Q	E	D	G	I	L	T	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		G	G	G					T	T									G	G	G	T		T	T	S		T	T											B	T	T	T	B															T	T			S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	P	V	P	I	E	W	P	Q	S	Y	D	S	I	N	P	D	L	I	K	D	K	R	S	P	E	G	K	K	K	Y	R	Q	G	M	K	T	I	F	G	W	F	R	W	T	G	L	K	P	G	K	E	F	P	H	G	D	S	L	A	S	L	F	S	E	E	I	Y	P	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									G	G	G	G	G	G		T	T	T		S		S	S	S												T	S					T	T			S	S	S	T	T	S	S	S	T	T											T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Sequence	C	V	K	Y	Y	A	E	A	Q	R	D	L	E	D	E	E	G	E	S	G	V	D	L	P	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T		S	S	G	G	G	T	T