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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3q5eG_

Fold library idPDB HeaderMoleculeTitle
c3q5eG_PDB header: hydrolaseChain: G: PDB Molecule: atlastin-1;PDBTitle: crystal structure of human atlastin-1 (residues 1-447) bound to gdp,2 crystal form 2


Added to library: Wed Jan 9 15:46:33 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KKAGPVQVLIVKDDHSFELDETALNRILLSEAVRDKEVVAVSVAGAFRKGKSFLMDFMLRYMYNQESVDW
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Known secondary structure (DSSP)




SSS

TSTTTTTSBTTSSSTT
S
T
 .........80.........90.........100.........110.........120.........130.........140
Sequence VGDYNEPLTGFSWRTGIQIWSEIFLINKPDGKKVAVLLMDTQGTRDSATVFALSTMISSIQVYNLSQNVQ
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Known secondary structure (DSSP) T

TTSB

S




SS

TTS



S
SSSS

 .........150.........160.........170.........180.........190.........200.........210
Sequence EDDLQHLQLFTEYGRLAMEETFLKPFQSLIFLVRDWSFPYEFSYGADGGAKFLEKRLKVRKHIHSCFTNI
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Known secondary structure (DSSP) TTSS
STT


TTTS
SB


 .........220.........230.........240.........250.........260.........270.........280
Sequence SCFLLPHPGLKVATNPNFDGKLKEIDDEFIKNLKILIPWLLSPESLDIKEINGNKITCRGLVEYFKAYIK
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Known secondary structure (DSSP)




T
SS

SBGGGS
STTT



TT
B
 .........290.........300.........310.........320.........330.........340.........350
Sequence IYQGEELPHPKSMLQATAEANNLAAVATAKDTYNKKMEEICGGDKPFLAPNDLQTKHLQLKEESVKLFRG
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Known secondary structure (DSSP) SSSS


TTSSSS
SSSS


TTTTTTSTTTSS
 .........360.........370.........380....
Sequence VKKMGGEEFSRRYLQQLESEIDELYIQYIKHNDS
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Known secondary structure (DSSP) S

SSSSSSSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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