Fold library entry viewer: c3pvlA_

Added to library: Sat Mar 5 08:45:02 2011
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	E	D	L	S	E	Y	K	F	A	K	F	A	A	T	Y	F	Q	G	T	T	T	H	S	Y	T	R	R	P	L	K	Q	P	L	L	Y	H	D	D	E	G	D	Q	L	A	A	L	A	V	W	I	T	I	L	R	F	M	G	D	L	P	E	P	K	Y	H	K	I	P	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T											B			S	S		S	S				S			S	S		S	B			S	S																			T	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	M	T	K	I	Y	E	T	L	G	K	K	T	Y	K	R	E	L	Q	A	L	Q	Q	G	N	S	M	L	E	D	R	P	T	S	N	L	E	K	L	H	F	I	I	G	N	G	I	L	R	P	A	L	R	D	E	I	Y	C	Q	I	S	K	Q	L	T	H	N	P	S	K	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T	T										T	T					T	T	S		S	S																			G	G	G												T	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	Y	A	R	G	W	I	L	V	S	L	C	V	G	C	F	A	P	S	E	K	F	V	K	Y	L	R	N	F	I	H	G	G	P	P	G	Y	A	P	Y	C	E	E	R	L	R	R	T	F	V	N	G	T	R	T	Q	P	P	S	W	L	E	L	Q	A	T	K	S	K	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				T	T	T										T	S		T	T	T																		S	S													T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	P	I	M	L	P	V	T	F	M	D	G	T	T	K	T	L	L	T	D	S	A	T	T	A	R	E	L	C	N	A	L	A	D	K	I	S	L	K	D	R	F	G	F	S	L	Y	I	A	L	F	D	K	V	S	S	L	G	S	G	S	D	H	V	M	D	A	I	S	Q	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	S									T	T		B												T	T		S	S		T	T								T	T							T	S	S		B
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	E	Q	Y	A	K	E	Q	G	A	Q	E	R	N	A	P	W	R	L	F	F	R	K	E	V	F	T	P	W	H	N	P	S	E	D	N	V	A	T	N	L	I	Y	Q	Q	V	V	R	G	V	K	F	G	E	Y	R	C	E	K	E	D	D	L	A	E	L	A	S	Q	Q	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T			G	G	G														T	T			G	G	G																			T	S	S			S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	F	V	D	Y	G	S	E	M	I	L	E	R	L	L	S	L	V	P	T	Y	I	P	D	R	E	I	T	P	L	K	N	L	E	K	W	A	Q	L	A	I	A	A	H	K	K	G	I	Y	A	Q	R	R	T	D	S	Q	K	V	K	E	D	V	V	N	Y	A	R	F	K	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T															S		G	G	G			S	S	S																			T	T		S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	P	L	L	F	S	R	F	Y	E	A	Y	K	F	S	G	P	P	L	P	K	S	D	V	I	V	A	V	N	W	T	G	V	Y	F	V	D	E	Q	E	Q	V	L	L	E	L	S	F	P	E	I	M	A	V	S	S	S	R	G	T	K	M	M	A	P	S	F	T	L	A	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	S											S	S			S		S								T	T							T	T									G	G	G											S	S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	I	K	G	D	E	Y	T	F	T	S	S	N	A	E	D	I	R	D	L	V	V	T	F	L	E	G	L	R	K	R	S	K	Y	V	V	A	L	Q	D	N	P	N	S	G	F	L	S	F	A	K	G	D	L	I	I	L	D	H	D	T	G	E	Q	V	M	N	S	G	W	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S								T	T																									S	S							B					T	T						S	S									S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.
Sequence	N	G	I	N	E	R	T	K	Q	R	G	D	F	P	T	D	C	V	Y	V	M	P	T	V	T	L	P	P	R	E	I	V	A	L	V	T	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	T								G	G	G							S	S

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PDB structure

FASTA sequence

Hidden Markov model

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