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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3pplB_

Fold library idPDB HeaderMoleculeTitle
c3pplB_PDB header: transferaseChain: B: PDB Molecule: aspartate aminotransferase;PDBTitle: crystal structure of an aspartate transaminase (ncgl0237, cgl0240)2 from corynebacterium glutamicum atcc 13032 kitasato at 1.25 a3 resolution


Added to library: Tue Dec 28 20:05:46 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VSLQDFDAERIGLFHEDIKRKFDELKSKNLKLDLTRGKPSSEQLDFADELLALPGKGDFKAADGTDVRNY
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Known secondary structure (DSSP)

GGGS
T









TTGGGGG
S
TT

B
TTS
BTTSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence GGLDGIVDIRQIWADLLGVPVEQVLAGDASSLNIXFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYD
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Known secondary structure (DSSP)

SS

TS
GGG
SS


TT
SS
GGGSS

S

 .........150.........160.........170.........180.........190.........200.........210
Sequence RHFSITERFGFEXISVPXNEDGPDXDAVEELVKNPQVKGXWVVPVFSNPTGFTVTEDVAKRLSAXETAAP
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Known secondary structure (DSSP) TT
TT
TTSTT

SS
TTT







SST
 .........220.........230.........240.........250.........260.........270.........280
Sequence DFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKITLAGAGVSFFLTSAENRKWYTGH
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Known secondary structure (DSSP) T

TTTT
BSSS






TT
TT
STTTS
TTTS


 .........290.........300.........310.........320.........330.........340.........350
Sequence AGIRGIGPNKVNQLAHARYFGDAEGVRAVXRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVPAGGYFIS
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Known secondary structure (DSSP)
S



SGGGT




SBSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence LDVVPGTASRVAELAKEAGIALTGAGSSYPLRQDPENKNLRLAPSLPPVEELEVAXDGVATCVLLAAAEH
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Known secondary structure (DSSP)
STT
TT


TTTTSGGG

TTS


SSS
 ..
Sequence YA
Predicted secondary structure

SS confidence

Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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