PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3pltB_

Fold library id	PDB Header	Molecule	Title
c3pltB_	PDB header: structural protein	Chain: B: PDB Molecule: sphingolipid long chain base-responsive protein lsp1;	PDBTitle: crystal structure of lsp1 from saccharomyces cerevisiae

Links to external resources
Added to library: Sun Jun 26 11:20:34 2011

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G P E L A R K L S Q L V K T E K G V L R A M E V V A S E R R E A A K Q L S L W G A D N D D D V S D V T D K L G V L I Y E L G E L Q D Q F I D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence K Y D Q Y R V T L K S I R N I E A S V Q P S R D R K E K I T D E I A H L K Y K D P Q S T K I P V L E Q E L V R A E A E S L V A E A Q L S N I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . .

Sequence T R E K L K A A Y S Y M F D S L R E L S E K F A L I A G Y G K A L L E L L D D S P P A Y D G Y E A S R Q I I M D A E S A L E S W T L D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	P	E	L	A	R	K	L	S	Q	L	V	K	T	E	K	G	V	L	R	A	M	E	V	V	A	S	E	R	R	E	A	A	K	Q	L	S	L	W	G	A	D	N	D	D	D	V	S	D	V	T	D	K	L	G	V	L	I	Y	E	L	G	E	L	Q	D	Q	F	I	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G																																				T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	Y	D	Q	Y	R	V	T	L	K	S	I	R	N	I	E	A	S	V	Q	P	S	R	D	R	K	E	K	I	T	D	E	I	A	H	L	K	Y	K	D	P	Q	S	T	K	I	P	V	L	E	Q	E	L	V	R	A	E	A	E	S	L	V	A	E	A	Q	L	S	N	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																					T	T	S				T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Sequence	T	R	E	K	L	K	A	A	Y	S	Y	M	F	D	S	L	R	E	L	S	E	K	F	A	L	I	A	G	Y	G	K	A	L	L	E	L	L	D	D	S	P	P	A	Y	D	G	Y	E	A	S	R	Q	I	I	M	D	A	E	S	A	L	E	S	W	T	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																			T	T	S																										T