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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3pl6C_

Fold library idPDB HeaderMoleculeTitle
c3pl6C_PDB header: immune systemChain: C: PDB Molecule: t-cell receptor alpha chain;PDBTitle: structure of autoimmune tcr hy.1b11 in complex with hla-dq1 and mbp2 85-99


Added to library: Wed Jan 9 22:38:34 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ENVEQHPSTLSVQEGDSAVIKCTYSDSASNYFPWYKQELGKRPQLIIDIRSNVGEKKDQRIAVTLNKTAK
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Known secondary structure (DSSP)


STTS
S
TT
TTS
TT
STTTTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence HFSLHITETQPEDSAVYFCAASSFGNEKLTFGTGTRLTIIPNIQNPDPAVYQLRDSKSSDKSVCLFTDFD
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Known secondary structure (DSSP)
S

GGG
SS

S






SS






TT


S

 .........150.........160.........170.........180.........190.
Sequence SQTNVSQSKDSDVYITDKCVLDMRSMDFKSNSAVAWSNKSDFACANAFNNS
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Known secondary structure (DSSP) TT





SSTT





TTTT



TT

SS
S




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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