PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c3pjaK_

Fold library id	PDB Header	Molecule	Title
c3pjaK_	PDB header: hydrolase	Chain: K: PDB Molecule: translin-associated protein x;	PDBTitle: crystal structure of human c3po complex

Links to external resources
Added to library: Sat May 14 08:57:46 2011

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S S S P V M L A F K S F Q Q E L D A R H D K Y E R L V K L S R D I T V E S K R T I F L L H R I T S A P D M E D I L T E S E I K L D G V R Q K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T
S S T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence I F Q V A Q E L S G E D M H Q F H R A I T T G L Q E Y V E A V S F Q H F I K T R S L I S M D E I N K Q L I F T T T W R L R V T P V D Y L L G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
G G G G S S
T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V A D L T G E L M R M C I N S V G N G D I D T P F E V S Q F L R Q V Y D G F S F I G N T G P Y E V S K K L Y T L K Q S L A K V E N A C Y A L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S G G G S

. . . . . . . . . 220 . .

Sequence K V R G S E I P K H M L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T

Download: PDB structure FASTA sequence
Hidden Markov model

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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	S	S	P	V	M	L	A	F	K	S	F	Q	Q	E	L	D	A	R	H	D	K	Y	E	R	L	V	K	L	S	R	D	I	T	V	E	S	K	R	T	I	F	L	L	H	R	I	T	S	A	P	D	M	E	D	I	L	T	E	S	E	I	K	L	D	G	V	R	Q	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S																																										T	T			S	S	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	F	Q	V	A	Q	E	L	S	G	E	D	M	H	Q	F	H	R	A	I	T	T	G	L	Q	E	Y	V	E	A	V	S	F	Q	H	F	I	K	T	R	S	L	I	S	M	D	E	I	N	K	Q	L	I	F	T	T	T	W	R	L	R	V	T	P	V	D	Y	L	L	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	S		G	G	G	G																								S	S										T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	A	D	L	T	G	E	L	M	R	M	C	I	N	S	V	G	N	G	D	I	D	T	P	F	E	V	S	Q	F	L	R	Q	V	Y	D	G	F	S	F	I	G	N	T	G	P	Y	E	V	S	K	K	L	Y	T	L	K	Q	S	L	A	K	V	E	N	A	C	Y	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		T	T		S	S																				G	G	G	S
	.	.	.	.	.	.	.	.	.	220	.	.
Sequence	K	V	R	G	S	E	I	P	K	H	M	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T