Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3pe7A_

Fold library idPDB HeaderMoleculeTitle
c3pe7A_PDB header: lyaseChain: A: PDB Molecule: oligogalacturonate lyase;PDBTitle: oligogalacturonate lyase in complex with manganese


Added to library: Sat Nov 6 12:12:51 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MAKGKQIPLTFDTYQDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQ
Predicted secondary structure





































SS confidence





































































Known secondary structure (DSSP)

TT




TTT


S
TTS



TTS

B
TTS

TTSS
TTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence VATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLV
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP)


SS
B
SSS

TTSSTTTTTT



TT
TTSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence GIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGP
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP) GGG




SGGG


TTT

SS
TT
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence HDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLT
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP) TTTSS
STTS


S



TT
TTSS
TT



TTT

 .........290.........300.........310.........320.........330.........340.........350
Sequence SMPACSHLMSNYDGSLMVGDGSDAENDPFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDD
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP)


TTSS






TTTT






BTTBSSTT




TTS
 .........360.........370......
Sequence KQILFTSDVHGKPALYLATLPESVWK
Predicted secondary structure









SS confidence

























Known secondary structure (DSSP) S
TTSS


GGGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D