PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3pdyB_

Fold library id	PDB Header	Molecule	Title
c3pdyB_	PDB header: structural protein	Chain: B: PDB Molecule: plectin;	PDBTitle: structure of the third and fourth spectrin repeats of the plakin2 domain of plectin

Links to external resources
Added to library: Sat Feb 5 08:44:09 2011

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence H M E L E D S T L R Y L Q D L L A W V E E N Q H R V D G A E W G V D L P S V E A Q L G S H R G L H Q S I E E F R A K I E R A R S D E G Q L S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
S S G G G G S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence P A T R G A Y R D C L G R L D L Q Y A K L L N S S K A R L R S L E S L H S F V A A A T K E L M W L N E K E E E E V G F D W S D R N T N M T A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . .

Sequence K K E S Y S A L M R E L E L K E K K I K E L Q N A G D R L L R E D H P A R P T V E S F Q A A L Q T Q W S W M L Q L C C C I E A H L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	H	M	E	L	E	D	S	T	L	R	Y	L	Q	D	L	L	A	W	V	E	E	N	Q	H	R	V	D	G	A	E	W	G	V	D	L	P	S	V	E	A	Q	L	G	S	H	R	G	L	H	Q	S	I	E	E	F	R	A	K	I	E	R	A	R	S	D	E	G	Q	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																												T					S	S																															G	G	G	G	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	A	T	R	G	A	Y	R	D	C	L	G	R	L	D	L	Q	Y	A	K	L	L	N	S	S	K	A	R	L	R	S	L	E	S	L	H	S	F	V	A	A	A	T	K	E	L	M	W	L	N	E	K	E	E	E	E	V	G	F	D	W	S	D	R	N	T	N	M	T	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																																											S			S	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Sequence	K	K	E	S	Y	S	A	L	M	R	E	L	E	L	K	E	K	K	I	K	E	L	Q	N	A	G	D	R	L	L	R	E	D	H	P	A	R	P	T	V	E	S	F	Q	A	A	L	Q	T	Q	W	S	W	M	L	Q	L	C	C	C	I	E	A	H	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																T	T		T	T																											T	T