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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3pduF_

Fold library idPDB HeaderMoleculeTitle
c3pduF_PDB header: oxidoreductaseChain: F: PDB Molecule: 3-hydroxyisobutyrate dehydrogenase family protein;PDBTitle: crystal structure of gamma-hydroxybutyrate dehydrogenase from2 geobacter sulfurreducens in complex with nadp+


Added to library: Sat Jan 14 21:41:41 2012
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQASSPAEVCAACDITIAMLADPAAA
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Known secondary structure (DSSP)



STTTT


SSGGGGT

SS
S

SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence REVCFGANGVLEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGRFLEAPVSGTKKPAEDGTLIILAAGDQ
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Known secondary structure (DSSP) STT


TT

S


TT




T

 .........150.........160.........170.........180.........190.........200.........210
Sequence SLFTDAGPAFAALGKKCLHLGEVGQGARMKLVVNMIMGQMMTALGEGMALGRNCGLDGGQLLEVLDAGAM
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Known secondary structure (DSSP) T
SSTTTT

STT
 .........220.........230.........240.........250.........260.........270.........280
Sequence ANPMFKGKGQMLLSGEFPTSFPLKHMQKDLRLAVELGDRLGQPLHGAATANESFKRARAAGHADEDFAAV
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Known secondary structure (DSSP)

T



SSBT


TT
TTSBGGGG
 ......
Sequence FRVLEA
Predicted secondary structure
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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