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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3pbnA_

Fold library idPDB HeaderMoleculeTitle
c3pbnA_PDB header: hydrolase/antibioticChain: A: PDB Molecule: penicillin-binding protein 3;PDBTitle: crystal structure of apo pbp3 from pseudomonas aeruginosa


Added to library: Wed Jan 9 15:42:03 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AHRGLITDRNGEPLAVSTPVTTLWANPKELMTAKERWPQLAAALGQDTKLFADRIEKVPGVYSIEEFRRF
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Known secondary structure (DSSP)





TTS


B

TTTGGG
GGGT




TT
B

 .........80.........90.........100.........110.........120.........130.........140
Sequence YPAGEVVAHAVGFTDVDDRGREGIELAFDEWLAKTLALSIDLRLQYLAHRELRNALLENGAKAGSLVIMD
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Known secondary structure (DSSP)
TTGGGG

B
TTS
B
ST


BS

T
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence VKTGEILAMTNQPTYNPNNRRNLQPAAMRNRAMIDVFEPGSTVKPFSMSAALASGRWKPSDIVDVYPGTL
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Known secondary structure (DSSP) TTT
BS


TT

SS

GGGG



B

GGGGTTS

TT

TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence QIGRYTIRDVSRNSRQLDLTGILIKSSNVGISKIAFDIGAESIYSVMQQVGLGQDTGLGFPGERVGNLPN
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Known secondary structure (DSSP) TT
SS


STT

TTTTS

S


TT



B


 .........290.........300.........310.........320.........330.........340.........350
Sequence HRKWPKAETATLAYGYGLSVTAIQLAHAYAALANDGKSVPLSMTRVDRVPDGVQVISPEVASTVQGMLQQ
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Known secondary structure (DSSP)
SS

TTSS
BB
TTT


BSB

SS




S
 .........360.........370.........380.........390.........400.........410.........420
Sequence VVEAQGGVFRAQVPGYHAAGKSGTARKNAYRSLFAGFAPATDPRIAMVVVIDEPSKAGYFGGLVSAPVFS
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Known secondary structure (DSSP) STTS
GGG

TTS





TTS



TT

TTGGGTT
 .........430........
Sequence KVMAGALRLMNVPPDNLP
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Known secondary structure (DSSP) TT







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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