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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3p8cB_

Fold library idPDB HeaderMoleculeTitle
c3p8cB_PDB header: protein bindingChain: B: PDB Molecule: nck-associated protein 1;PDBTitle: structure and control of the actin regulatory wave complex


Added to library: Sat Dec 11 15:19:31 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QPSQQKLAEKLTILNDRGVGMLTRLYNIKKACGDPKAKPSYLIDKNLESAVKFIVRKFPAVENQQLAQLQ
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Known secondary structure (DSSP)
GGGS
STTTS
GGGT
TTTTT




TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence KEKSEILKNLALYYFTFVDVMEFKDHVCELLNTIDVCQVFFDITVNFDLTKNYLDLIITYTTLMILLSRI
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Known secondary structure (DSSP) TT



TTTST
 .........150.........160.........170.........180.........190.........200.........210
Sequence EERKAIIGLYNYAHEMTHGASDREYPRLGQMIVDYENPLKKMMEEFVPHSKSLSDALISLQMVYPRRNLS
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Known secondary structure (DSSP) TTTTSSS

TTTSSTTTTGGGGTS

 .........220.........230.........240.........250.........260.........270.........280
Sequence ADQWRNAQLLSLISAPSTMLNPAQSDTMPCEYLSLDAMEKWIIFGFILCHGILNTDATALNLWKLALQSS
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Known secondary structure (DSSP) TTTT
SSSSGGGTTS



TTS
TT
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence SCLSLFRDEVFHIHKAAEDLFVNIRGYNKRINDIRECKEAAVSHAGSMHRERRKFLRSALKELATVLSDQ
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Known secondary structure (DSSP) STTTT
GGGTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence PGLLGPKALFVFMALSFARDEIIWLLRHADNMPKKSADDFIDKHIAELIFYMEELRAHVRKYGPVMQRYY
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Known secondary structure (DSSP) GGGGTTTS

SSTTTT

TTS
 .........430.........440.........450.........460.........470.........480.........490
Sequence VQYLSGFDAVVLNELVQNLSVCPEDESIIMSSFVNTMTSLSVKQVEDGEVFDFRGMRLDWFRLQAYTSVS
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Known secondary structure (DSSP) TTT
S


T

TT




ST
 .........500.........510.........520.........530.........540.........550.........560
Sequence KASLGLADHRELGKMMNTIIFHTKMVDSLVEMLVETSDLSIFCFYSRAFEKMFQQCLELPSQSRYSIAFP
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Known secondary structure (DSSP) T
SS
GGG



GGGGG
STTTT
 .........570.........580.........590.........600.........610.........620.........630
Sequence LLCTHFMSCTHELCPEERHHIGDRSLSLCNMFLDEMAKQARNLITDICTEQCTLSDQLLPKHCAKTISQA
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Known secondary structure (DSSP) GGGGGGG

TT
GGGTTSGGGG
 .........640.........650.........660.........670.........680.........690.........700
Sequence VNKEKPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTKSIVGMT
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Known secondary structure (DSSP) TT


TTGGG

S
TTS

TS
S
TT
T
 .........710.........720.........730.........740.........750.........760.........770
Sequence MYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLE
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Known secondary structure (DSSP) T
BTTTTB


GGGTSS

TTSSB
TTS
B
 .........780.........790.........800.........810.........820.........830.........840
Sequence TLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLSELLGPYGMKFLSESLMWHISSQVA
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Known secondary structure (DSSP) TTTSTTTT
SSS



S
TS
 .........850.........860.........870.........880.........890.........900.........910
Sequence ELKKLVVENVDVLTQMRTSFDKPDQMAALFKRLSSVDSVLKRMTIIGVILSFRSLAQEALRDVLSYHIPF
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Known secondary structure (DSSP) TT
TT
TT



 .........920.........930.........940.........950.........960.........970.........980
Sequence LVSSIEDFKDHDMKVAMNVYELSSAAGLPCEIDPALVVALSSSPEEEYKIACLLMVFVAVSLPTLASNVM
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Known secondary structure (DSSP)


SSTT


SS
T

GGGGGG
GG
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence SQYSPAIEGHCNNIHCLAKAINQIAAALFTIHKGSIEDRLKEFLALASSSLLKIGQETDKTTTRNRESVY
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Known secondary structure (DSSP) G
TTTTTT
GGGTT

TTS


TTTTTT
 .........1060.........1070.........1080......
Sequence LLLDMIVQESPFLTMDLLESCFPYVLLRNAYHAVYK
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Known secondary structure (DSSP)
TT

S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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