Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3p1wA_

Fold library idPDB HeaderMoleculeTitle
c3p1wA_PDB header: protein transportChain: A: PDB Molecule: rabgdi protein;PDBTitle: crystal structure of rab gdi from plasmodium falciparum, pfl2060c


Added to library: Sat Dec 18 18:32:30 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QGEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETASLNLTNLYNTFKPKENIPSKYGENRH
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP)




STT


SSSSS
GGG


TTS


GGG

GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence WNVDLIPKFILVGGNLVKILKKTRVTNYLEWLVVEGSYVYQHQKKGFLTSEKFIHKVPATDMEALVSPLL
Predicted secondary structure
































SS confidence





































































Known secondary structure (DSSP)

SS

BTTSTT
GGGS

S


SSS




ST
TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence SLMEKNRCKNFYQYVSEWDANKRNTWDNLDPYKLTMLEIYKHFNLCQLTIDFLGHAVALYLNDDYLKQPA
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP)


TT
GGGSTT

TTTSBTT

TS

SSSGGGGSB
 .........220.........230.........240.........250.........260.........270.........280
Sequence YLTLERIKLYMQSISAFGKSPFIYPLYGLGGIPEGFSRMCAINTFMLNKNVVDFVFDDDNKVCGIKSSDG
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP) SS
STT
TT

SS


TTS
TTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence EIAYCDKVICDPSYVMHLKNKIKKIGQVIRCICILSNPIPETNQTNSCQIIIPQNQLNRKSDIYINLVSF
Predicted secondary structure





































SS confidence





































































Known secondary structure (DSSP)

GGG
TTSTTSSS

TTSTT
SS
GGGGTSSS
G
 .........360.........370.........380.........390.........400.........410.........420
Sequence QHGVTLKGKYIAIVSATVETNNPIKEIEKPLELLGTIEEKFVKISDLYVSTSKKPADNIFVTSSYDATSH
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP) GGTSS
TT


SS
TTT
SS
SS
TT





S
SB
 .........430.........440..
Sequence FETATNDLLQIWENLWGQKLNF
Predicted secondary structure






SS confidence





















Known secondary structure (DSSP) SSS




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D