PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3owqB_

Fold library id	PDB Header	Molecule	Title
c3owqB_	PDB header: structural genomics, unknown function	Chain: B: PDB Molecule: lin1025 protein;	PDBTitle: x-ray structure of lin1025 protein from listeria innocua, northeast2 structural genomics consortium target lkr164

Links to external resources
Added to library: Thu Oct 28 12:56:47 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence K K P F S V L L X G S D N G R A D T I I L A T A N K Q Q N A V E X V S I P R D T K V N G D I G K I N A S Y S N G G P S G T V S A V E K L X P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T
T T B B
B G G G G G G T T S S T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G V P V D Y F I S I N X E G F K D L V D A V G G I T V Y N D I D L T E V N S K F V K G N I T L N G T D A L Q Y V R I R H E D P R G D F G R Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T
S
T T T
T T
S
T
T T
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence D R Q R D V I I G I A N K V I S S S G X K A V G D N F Q T N X T L T D I T S X A T N Y S S V L K N V D S Q E L K G E G E X I Y S E S Y G F D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S S
T T T G G G S
G G G G G S
T T T T

. . . . . . . . . 220 . . . . . . . . . 230 . . .

Sequence L Y Y F A P D E T D L E R V I N X F K K S L D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	K	P	F	S	V	L	L	X	G	S	D	N	G	R	A	D	T	I	I	L	A	T	A	N	K	Q	Q	N	A	V	E	X	V	S	I	P	R	D	T	K	V	N	G	D	I	G	K	I	N	A	S	Y	S	N	G	G	P	S	G	T	V	S	A	V	E	K	L	X	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																										T	T	T	T									T	T	B	B							B	G	G	G	G	G	G	T	T												S	S	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	V	P	V	D	Y	F	I	S	I	N	X	E	G	F	K	D	L	V	D	A	V	G	G	I	T	V	Y	N	D	I	D	L	T	E	V	N	S	K	F	V	K	G	N	I	T	L	N	G	T	D	A	L	Q	Y	V	R	I	R	H	E	D	P	R	G	D	F	G	R	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T																					T	T								S			T	T	T		T	T			S															T			T	T		T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	D	R	Q	R	D	V	I	I	G	I	A	N	K	V	I	S	S	S	G	X	K	A	V	G	D	N	F	Q	T	N	X	T	L	T	D	I	T	S	X	A	T	N	Y	S	S	V	L	K	N	V	D	S	Q	E	L	K	G	E	G	E	X	I	Y	S	E	S	Y	G	F	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	S	S				T	T	T	G	G	G				S														G	G	G	G	G	S																T	T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Sequence	L	Y	Y	F	A	P	D	E	T	D	L	E	R	V	I	N	X	F	K	K	S	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T												T