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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3ov6A_

Fold library idPDB HeaderMoleculeTitle
c3ov6A_PDB header: immune systemChain: A: PDB Molecule: beta-2-microglobulin, t-cell surface glycoprotein cd1c, t-PDBTitle: cd1c in complex with mpm (mannosyl-beta1-phosphomycoketide)


Added to library: Sat Jan 22 08:54:14 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTE
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Known secondary structure (DSSP)


B

SS


TTS
BSS
TT
SS




TT

 .........80.........90.........100.........110.........120.........130.........140
Sequence FTPTEKDEYACRVNHVTLSQPKIVKWDRDMGGGGEHVSFHVIQIFSFVNQSWARGQGSGWLDELQTHGWD
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Known secondary structure (DSSP)


SS

TT
SS

GGGTT


SSSS
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence SESGTIIFLHQWSKGQFSNEELSDLELLFRFYLFGLTREIQDHASSKYPFEVQVKAGCELHSGGSPEGFF
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Known secondary structure (DSSP) TTTT
STTTTTT

SS





TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence QVAFNGLDLLSFQQTTWVPSPGCGSLAQSVCHLLNHQYEGVTETVYNLIRSTCPRFLLGLLDAGKMYVHR
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Known secondary structure (DSSP) TTTT
SS

T

STS
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence QVKPEAWLSSGPSPGPGRLQLVCHVSGFYPKPVWVMWMRGEQEQQGTQLGDILPNAQGTWYLRATLDVAD
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Known secondary structure (DSSP)
B


S

STTBSS

TT
TT




TTS
G
 .........360.........370......
Sequence GEAAGLSCRVKHSSLEGQDIILYWHH
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Known secondary structure (DSSP) GG
TT
GGGTT





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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