Fold library entry viewer: c3ottB_

Added to library: Sat Aug 13 10:09:00 2011
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	N	Y	Q	Q	F	D	N	I	Y	L	G	A	E	A	S	V	V	S	C	F	L	Q	D	S	E	G	L	I	W	I	G	S	N	K	G	L	F	S	Y	D	G	Y	S	T	Q	Q	H	F	T	Y	G	E	N	N	N	T	R	I	Y	C	G	V	I	I	D	N	T	Y	L	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S								S	T	T											T	T								T	T							S	S						S		T	T	S	T	T	S	S									T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	M	G	T	D	N	G	I	L	V	Y	N	Y	R	A	D	R	Y	E	Q	P	E	T	D	F	P	T	D	V	R	T	M	A	L	Q	G	D	T	L	W	L	G	A	L	N	G	L	Y	T	Y	Q	L	Q	S	R	K	L	T	S	F	D	T	R	R	N	G	L	P	N	N	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S	S						T	T	T	T						S					S	S								T	T							T	T							T	T	T														S		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	Y	S	I	I	R	T	K	D	N	Q	I	Y	V	G	T	Y	N	G	L	C	R	Y	I	P	S	N	G	K	F	E	G	I	P	L	P	V	H	S	S	S	N	L	F	V	N	S	L	L	E	D	T	T	R	Q	C	V	W	I	G	T	E	G	Y	L	F	Q	Y	F	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T								T	T							T	T	T	T										S														T	T	T	T															T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	S	T	G	Q	I	K	Q	T	E	A	F	H	N	N	S	I	K	S	L	A	L	D	G	N	G	D	L	L	A	G	T	D	N	G	L	Y	V	Y	H	N	D	T	T	P	L	Q	H	I	I	H	D	S	R	N	I	Q	S	L	T	N	N	I	I	W	N	I	F	A	D	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T																				T	T	S							T	T								T	T	S									T	T		T	T	S		S		S									T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	E	H	N	I	W	L	G	T	D	Y	G	I	S	L	S	R	Y	N	S	L	Q	F	I	P	I	S	Q	I	T	G	T	G	D	G	N	Q	F	Y	S	L	F	R	D	S	K	G	F	Y	W	F	G	G	A	N	G	L	I	R	F	T	D	P	A	G	E	R	H	D	A	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T								S	S	S														T					S	S					B								T	T	S							T	T						S		T	T			S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	W	Y	R	M	G	D	K	T	Y	P	L	S	H	N	R	I	R	H	I	Y	E	D	K	E	Q	Q	L	W	I	A	T	D	G	S	I	N	R	Y	D	Y	A	T	R	Q	F	I	H	Y	N	I	V	D	N	T	G	T	Y	N	T	N	W	T	Y	Y	I	F	E	D	T	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T		S	S	S			S		S									T	T	S							T	T							T	T	T	T										T	T	S			B		S	S								T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	G	Q	L	W	I	S	T	C	L	G	G	I	F	V	V	D	K	H	K	L	M	Q	S	T	S	G	Q	Y	I	A	E	Q	N	Y	S	V	H	N	G	L	S	G	M	F	I	N	Q	I	I	P	D	N	E	G	N	V	W	V	L	L	Y	N	N	K	G	I	D	K	I	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S							S	S	S															S	S	S				S					T	T	T	T		S		S									S	S	S							T	T		S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	P	R	T	R	E	V	T	K	L	F	A	D	E	L	T	G	E	K	S	P	N	Y	L	L	C	D	E	D	G	L	L	W	V	G	F	H	G	G	V	M	R	I	N	P	K	D	E	S	Q	Q	S	I	S	F	G	S	F	S	N	N	E	I	L	S	M	T	C	V	K	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	T						S	T	T	T	S	S	G	G	G									T	T	S							T	T							T	T	T	T								S	S		S	S										T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	S	I	W	V	S	T	T	N	G	L	W	I	I	D	R	K	T	M	D	A	R	Q	Q	N	T	N	K	R	F	T	S	L	L	F	D	P	K	E	D	C	V	Y	L	G	G	A	D	G	F	G	I	S	H	S	N	L	A	T	Y	Q	P	E	R	P	I	L	L	T	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T							T	T	T													S						T	T	T	T							B	T							T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	Y	I	N	N	Q	L	V	S	P	R	T	R	D	D	V	P	N	I	R	Y	T	N	S	I	K	L	K	Y	D	Q	N	N	L	S	F	E	L	S	D	L	P	Y	S	L	D	E	K	N	K	F	V	Y	R	L	E	G	M	D	K	E	W	N	F	L	K	S	N	I	N	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T					T	T	T		T	T				G	G	G		S						T	T													T	T		S	S										T	T		S	S						T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.
Sequence	I	T	Y	S	N	L	S	Y	G	N	Y	Q	L	I	I	S	K	L	E	R	D	G	Q	P	S	N	R	P	H	I	L	N	I	R	I	L	P	P	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S			S										B		T	T	S		B		S

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PDB structure

FASTA sequence

Hidden Markov model

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