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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3oryA_

Fold library idPDB HeaderMoleculeTitle
c3oryA_PDB header: hydrolaseChain: A: PDB Molecule: flap endonuclease 1;PDBTitle: crystal structure of flap endonuclease 1 from hyperthermophilic2 archaeon desulfurococcus amylolyticus


Added to library: Sat Feb 12 08:47:50 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GVDMGVDLKDIIPGEAKTVIEDLRILHGKIIVIDGYNALYQFLAAIRQPDGTPLMDNNGRITSHLSGLFY
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Known secondary structure (DSSP)



S


GGG

GGG
SSGGGGTT

B
TTS
B
B
TTS
B
 .........80.........90.........100.........110.........120.........130.........140
Sequence RTINIVEAGIKPVYVFDGKPPELKAREIERRKAVKEEAAKKYEEAVQSGDLELARRYAMMSAKLTEEMVR
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Known secondary structure (DSSP) TT

SS
GGG
T
T






 .........150.........160.........170.........180.........190.........200.........210
Sequence DAKSLLDAMGIPWVQAPAEGEAQAAYIVKKGDAYASASQDYDSLLFGSPKLVRNLTISGRRKLPRKNEYV
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Known secondary structure (DSSP) T


SS
TTS
S
SSSTT
SSTTT

SSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence EVKPELIELDKLLVQLGITLENLIDIGILLGTDYNPDGFEGIGPKKALQLVKAYGGIEKIPKPILKSPIE
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Known secondary structure (DSSP)

T


BTTBTT
STT

TSSTTS
GGG


SS
 .........290.........300.........310.........320.........330.........340..
Sequence VDVIAIKKYFLQPQVTDNYRIEWHTPDPDAVKRILVDEHDFSIDRVSTALERYVKAFKENIR
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Known secondary structure (DSSP)

S



S









TTTT


T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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