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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3oqsA_

Fold library idPDB HeaderMoleculeTitle
c3oqsA_PDB header: protein transportChain: A: PDB Molecule: importin subunit alpha-2;PDBTitle: crystal structure of importin-alpha bound to a clic4 nls peptide


Added to library: Sat Jul 30 09:50:43 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GTVNWSVEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESA
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Known secondary structure (DSSP)

SS

TSS
TTSSS


TTT
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence WALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLA
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Known secondary structure (DSSP) TS
TTTT
S
T
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence LLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDG
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Known secondary structure (DSSP) TT
SS
GGGS



SS


TTSS
TSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence PNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNI
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Known secondary structure (DSSP) STTT
T
S
TTS
TTGGGGTT
SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence QKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGI
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Known secondary structure (DSSP) TTS
TTSS
S
TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence IEPLMNLLSAKDTKIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEALQRHENESVYKASLNL
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Known secondary structure (DSSP) GGGSS
TT
TTT
SS
 .....
Sequence IEKYF
Predicted secondary structure

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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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