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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3op5B_

Fold library idPDB HeaderMoleculeTitle
c3op5B_PDB header: transferaseChain: B: PDB Molecule: serine/threonine-protein kinase vrk1;PDBTitle: human vaccinia-related kinase 1


Added to library: Sat Sep 25 09:43:28 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EQFAVGEIITDMAAAAWKVGLPIGQFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAK
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Known secondary structure (DSSP)

S
TT

TT


-




SS


TT
STT


 .........80.........90.........100.........110.........120.........130.........140
Sequence PEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRIL
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Known secondary structure (DSSP) TT
S


S

TT
TTS


 .........150.........160.........170.........180.........190.........200.........210
Sequence DILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDA
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Known secondary structure (DSSP) TT




GGGSS
TT



TT
SSGGG



SS

SS





TTT

 .........220.........230.........240.........250.........260.........270.........280
Sequence HNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKY
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Known secondary structure (DSSP) TT



S

TTGGGTT

S
TT


 .........290.........300.........310.........
Sequence METVKLLDYTEKPLYENLRDILLQGLKAIGSKDDGKLDL
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Known secondary structure (DSSP) T

TT



TT









Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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