PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3onqB_

Fold library id	PDB Header	Molecule	Title
c3onqB_	PDB header: structural genomics, unknown function	Chain: B: PDB Molecule: regulator of polyketide synthase expression;	PDBTitle: crystal structure of regulator of polyketide synthase expression2 bad_0249 from bifidobacterium adolescentis

Links to external resources
Added to library: Sat Sep 18 09:06:36 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence Q A D I L D L L S G H T D D T T I E R L A F E C L L T N X T D D R V V S L X N I L G W Q G D F N C F A I G G V P S A S L A S T S L A I R K A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T
S T
S S
B S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence V R D L G G E H V V I G T Y G T F L L A L A C Q X G A V T P E V T C T A V X P A F S E D E P L Y L S P V R S G V A G A S H A L R E T X F S L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T
T T
G G G B
T T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence Q A A P A L S T P S R P L R A D E L L P E R A L L G D D Y A R E E L Y R N V Y Q V L R G E N P D D P T Y L T V S T F L K Y G S S L E N T A K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G
S S
S S T T T T T
T
S
T T
S T T S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . .

Sequence E L N V H P N T V R Y R L K R A A E T T G W D A T D P R D A Y V L T T A L A I G R X R D R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
S
T T S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Q	A	D	I	L	D	L	L	S	G	H	T	D	D	T	T	I	E	R	L	A	F	E	C	L	L	T	N	X	T	D	D	R	V	V	S	L	X	N	I	L	G	W	Q	G	D	F	N	C	F	A	I	G	G	V	P	S	A	S	L	A	S	T	S	L	A	I	R	K	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T																	T	T			S											T			S	S										B	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	R	D	L	G	G	E	H	V	V	I	G	T	Y	G	T	F	L	L	A	L	A	C	Q	X	G	A	V	T	P	E	V	T	C	T	A	V	X	P	A	F	S	E	D	E	P	L	Y	L	S	P	V	R	S	G	V	A	G	A	S	H	A	L	R	E	T	X	F	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T										T	T										T	T											G	G	G	B		T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Q	A	A	P	A	L	S	T	P	S	R	P	L	R	A	D	E	L	L	P	E	R	A	L	L	G	D	D	Y	A	R	E	E	L	Y	R	N	V	Y	Q	V	L	R	G	E	N	P	D	D	P	T	Y	L	T	V	S	T	F	L	K	Y	G	S	S	L	E	N	T	A	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G		S	S			S	S			T	T	T	T								T												T							S		T	T		S											T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Sequence	E	L	N	V	H	P	N	T	V	R	Y	R	L	K	R	A	A	E	T	T	G	W	D	A	T	D	P	R	D	A	Y	V	L	T	T	A	L	A	I	G	R	X	R	D	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	S																	S			T	T	S