Fold library entry viewer: c3okyA_

Added to library: Thu Oct 21 16:19:00 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Q	Y	S	T	F	H	S	E	N	R	D	W	T	F	N	H	L	T	V	H	R	R	T	G	A	V	Y	V	G	A	I	N	R	V	Y	K	L	T	G	N	L	T	I	Q	V	A	H	K	T	G	P	E	E	D	N	K	A	C	Y	P	P	L	I	V	Q	P	C	S	E	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S	T	T	S									T	T	T								T	T							T	T																T	T		S	S		T	T	T	S				S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	T	L	T	N	N	V	N	K	L	L	I	I	D	Y	S	E	N	R	L	L	A	C	G	S	L	Y	Q	G	V	C	K	L	L	R	L	D	D	L	F	I	L	V	E	P	S	H	K	K	E	H	Y	L	S	S	V	N	K	T	G	T	M	Y	G	V	I	V	R	S	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															G	G	G	T							S	S	T	T	T							T	T	T									S	S	G	G	G								S	S	S									T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	E	D	G	K	L	F	I	G	T	A	V	D	G	K	Q	D	Y	F	P	T	L	S	S	R	K	L	P	R	D	P	E	S	S	A	M	L	D	Y	E	L	H	S	D	F	V	S	S	L	I	K	I	P	S	D	T	L	A	L	V	S	H	F	D	I	F	Y	I	Y	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T												T	T		T	T	T	S		S								S	S	T	T		T	T	T	T		B	S				S	S			S												S	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	F	A	S	G	G	F	V	Y	F	L	T	V	Q	P	E	T	P	L	F	Y	T	S	R	I	V	R	L	C	K	D	D	P	K	F	H	S	Y	V	S	L	P	F	G	C	T	R	A	G	V	E	Y	R	L	L	Q	A	A	Y	L	A	K	P	G	E	A	L	A	Q	A	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T																								S	S		T	T		T	T											T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	N	I	S	S	D	E	D	V	L	F	A	I	F	S	K	G	Q	K	Q	Y	H	H	P	P	D	D	S	A	L	C	A	F	P	I	R	A	I	N	L	Q	I	K	E	R	L	Q	S	C	Y	H	G	E	G	N	L	E	L	N	W	L	L	G	K	D	V	Q	C	T	K	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T			T	T	S									S	B	S	S		S	S	S			S																									T	T		S	B								S	S			B
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	P	V	P	I	D	D	N	F	C	G	L	D	I	N	Q	P	L	G	G	S	T	P	V	E	G	L	T	L	Y	T	T	S	R	D	R	L	T	S	V	A	S	Y	V	Y	N	G	Y	S	V	V	F	V	G	T	K	S	G	K	L	K	K	I	R	A	D	G	P	P	H	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T					S	S	S		S	B			S	S											S	S	S		B									T	T								B	T	T	S										T	T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	G	V	Q	Y	E	M	V	S	V	F	K	D	G	S	P	I	L	R	D	M	A	F	S	I	N	Q	L	Y	L	Y	V	M	S	E	R	Q	V	T	R	V	P	V	E	S	C	E	Q	Y	T	T	C	G	E	C	L	S	S	G	D	P	H	C	G	W	C	A	L	H	N	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T						S						T	T	S	S							S	S							S			G	G	G			S					T	T	S			T	T					T	T	T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	C	S	R	R	D	K	C	Q	R	A	W	E	A	N	R	F	A	A	S	I	S	Q	C	M	S	L	E	V	H	P	N	S	I	S	V	S	D	H	S	R	L	L	S	L	V	V	N	D	A	P	N	L	S	E	G	I	A	C	A	F	G	N	L	T	E	V	E	G	Q	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				G	G	G	S	T	T	T	T	S	T	T	S				S	G	G	G								S	S				T	T	S		S									T					T	T							T	T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.
Sequence	S	G	S	Q	V	I	C	I	S	P	G	P	K	D	V	P	V	I	P	Q	D	W	F	G	L	E	L	Q	L	R	S	K	E	T	G	K	I	F	V	S	T	E	F	K	F	Y	N	C	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T									T	T	T	S																	T	T	T

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PDB structure

FASTA sequence

Hidden Markov model

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