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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3oiyB_

Fold library idPDB HeaderMoleculeTitle
c3oiyB_PDB header: isomeraseChain: B: PDB Molecule: reverse gyrase helicase domain;PDBTitle: helicase domain of reverse gyrase from thermotoga maritima


Added to library: Sat Dec 11 14:56:06 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EFWNEYEDFRSFFKKKFGKDLTGYQRLWAKRIVQGKSFTMVAPTGVGKTTFGMMTALWLARKGKKSALVF
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TTTTT

 .........80.........90.........100.........110.........120.........130.........140
Sequence PTVTLVKQTLERLQKLADEKVKIFGFYSSMKKEEKEKFEKSFEEDDYHILVFSTQFVSKNREKLSQKRFD
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S
 .........150.........160.........170.........180.........190.........200.........210
Sequence FVFVDDVDAVLKASRNIDTLLMMVGIPEEIIRKAFSTIKQGKIYERPKNLKPGILVVSSATAKPRGIRPL
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TSTT

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STT
 .........220.........230.........240.........250.........260.........270.........280
Sequence LFRDLLNFTVGRLVSVARNITHVRISSRSKEKLVELLEIFRDGILIFAQTEEEGKELYEYLKRFKFNVGE
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SSSSTT

 .........290.........300.........310.........320.........330.........340.........350
Sequence TWSEFEKNFEDFKVGKINILIGVQAYYVDLPERIKYVIFWGTPSGPDVYTYIQASGRSSRILNGVLVKGV
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Known secondary structure (DSSP) SSS
TTS
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TTT

S

TTT
TT

TT

 .........360.........370.........380.........390.........400
Sequence SVIFEEDEEIFESLKTRLLLIAEEEIIEEAEANWKELVHEVEESRRRSER
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Known secondary structure (DSSP)





GGG



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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