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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3ohmB_

Fold library idPDB HeaderMoleculeTitle
c3ohmB_PDB header: signaling protein / hydrolaseChain: B: PDB Molecule: 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterasePDBTitle: crystal structure of activated g alpha q bound to its effector2 phospholipase c beta 3


Added to library: Sat Oct 30 10:42:02 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QLEPPTVVETLRRGSKFIKWDEETSSRNLVTLRVDPNGFFLYWTGPNMEVDTLDISSIRDTRTGRYARLP
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Known secondary structure (DSSP)









TT

S


TTS

GGG
GGGTTTS


 .........80.........90.........100.........110.........120.........130.........140
Sequence KDPKIREVLEEKLMTVVSGPDPVNTVFLNFMAVQDDTAKVWSEELFKLAMNILAQNASRNTFLRKAYTKL
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Known secondary structure (DSSP)
S


TT
SSGGG
SSSS
T

 .........150.........160.........170.........180.........190.........200.........210
Sequence KLQVNQDGRIPVKNILKMFSADKKRVETALESCGLKFNRSESIRPDEFSLEIFERFLNKLCLRPDIDKIL
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Known secondary structure (DSSP) S

TTS
TTGGGTTT


STT

GGG

S

 .........220.........230.........240.........250.........260.........270.........280
Sequence LEIGAKGKPYLTLEQLMDFINQKQRDPRLNEVLYPPLRPSQARLLIEKYEPNQQFLERDQMSMEGFSRYL
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Known secondary structure (DSSP) TT

STT
SS
TTS
TTTS






TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence GGEENGILPLEALDLSTDMTQPLSAYFINSSHNTYLTAGQLAGTSSVEMYRQALLWGCRCVELDVWKGRP
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Known secondary structure (DSSP) TSTTS
SS
SS
S


S
GGG

BSSTTBSS
SS
B
STT




S
 .........360.........370.........380.........390.........400.........410.........420
Sequence PEEEPFITHGFTMTTEVPLRDVLEAIAETAFKTSPYPVILSFENHVDSAKQQAKMAEYCRSIFGDALLIE
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Known secondary structure (DSSP) SS



STTS

TTSS

S



TTGGGB

S
 .........430.........440.........450.........460.........470.........480.........490
Sequence PLDKYPLAPGVPLPSPQDLMGRILVKNKKRHTDEGTASSEVNATEEMSTLVNYIEPVKFKSFEAARKRNK
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Known secondary structure (DSSP)
BTTB
SSSS




TTTTTT






TTGGGTT




TT
SS





T
 .........500.........510.........520.........530.........540.........550.........560
Sequence CFEMSSFVETKAMEQLTKSPMEFVEYNKQQLSRIYPKGTRVDSSNYMPQLFWNVGCQLVALNFQTLDVAM
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Known secondary structure (DSSP) TTSS


TT
TT




TTTT
S
B
TT

S
 .........570.........580.........590.........600.........610.........620.........630
Sequence QLNAGVFEYNGRSGYLLKPEFMRRPDKSFDPFTEVIVDGIVANALRVKVISGQFLSDRKVGIYVEVDMFG
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Known secondary structure (DSSP) TTGGG
S

GGGT
TT



TT
SS

TT


S

SS


S
 .........640.........650.........660.........670.........680.........690.........700
Sequence LPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFEEGGKFVGHRILPVSAIRSGYHYV
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Known secondary structure (DSSP) STTT
B







SS
SSS
B




S
GGG
TTTTTT


 .........710.........720.........730.........740.........750.........
Sequence CLRNEANQPLCLPALLIYTEASDYIPDDHQDYAEALINPIKHVSLMDQRARQLAALIGE
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Known secondary structure (DSSP)
TTS



GGG
T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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