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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3oe6A_

Fold library idPDB HeaderMoleculeTitle
c3oe6A_PDB header: singnaling protein,hydrolaseChain: A: PDB Molecule: c-x-c chemokine receptor type 4, lysozyme chimera;PDBTitle: crystal structure of the cxcr4 chemokine receptor in complex with a2 small molecule antagonist it1t in i222 spacegroup


Added to library: Sat Oct 30 11:28:38 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NFNKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFVITLPFWAVDAVANWYF
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Known secondary structure (DSSP)
T
SSS

TTT

TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence GNFLCKAVHVIYTVNLYSSVWILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIF
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Known secondary structure (DSSP)
S
TT
TTTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence ANVSEADDRYICDRFYPNDLWVVVFQFQHIMVGLILPGIVILSCYCIIISKLDEGLRLKIYKDTEGYYTI
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Known secondary structure (DSSP) TT

SSTTT





SS

TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence GIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRA
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Known secondary structure (DSSP) TTTS


TTTTTTS

SS


TTTTTT
TTTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence ALINMVFQMGETGVAGFSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDRKALKTTVIL
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Known secondary structure (DSSP)
TTTGGG


TT
TTSSSTSS


 .........360.........370.........380.........390.........400.........410........
Sequence ILAFFACWLPYYIGISIDSFILLEIIKQGCEFENTVHKWISITEALAFFHCCLNPILYAFLGAKFKTS
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Known secondary structure (DSSP) TTSS


STTGGGGGTTTTTT

TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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