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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3odxA_

Fold library idPDB HeaderMoleculeTitle
c3odxA_PDB header: signaling proteinChain: A: PDB Molecule: rho guanine nucleotide exchange factor 1;PDBTitle: crystal structure of an n-terminally truncated linker-dh/ph domains of2 p115-rhogef


Added to library: Sat Jan 8 11:07:18 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PKSQVKRQEVISELLVTEAAHVRMLRVLHDLFFQPMAECLFFPLEELQNIFPSLDELIEVHSLFLDRLMK
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Known secondary structure (DSSP)

TTTSS
STT
 .........80.........90.........100.........110.........120.........130.........140
Sequence RRQESIEEIGDVLLARFDGAEGSWFQKISSRFCSRQSFALEQLKAKQRKDPRFCAFVQEAESRPRCRRLQ
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Known secondary structure (DSSP) T




ST
TSGGGTT

 .........150.........160.........170.........180.........190.........200.........210
Sequence LKDMIPTEMQRLTKYPLLLQSIGQNTEEPTEREKVELAAECCREILHHVNQAVRDMEDLLRLKDYQRRLD
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Known secondary structure (DSSP) TTTT

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence LSHLRQSSDPLSEFKNLDITKKKLVHEGPLTWRVTKDKAVEVHVLLLDDLLLLLQRQDERLLLKSHSLRP
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Known secondary structure (DSSP)
TTTTT




GGGTT


SSS
TTSSTT






S
 .........290.........300.........310.........320.........330......
Sequence VLRLTSAMTREVATDHKAFYVLFTEAQIYELVAQTVSERKNWCALITETAGSLKVP
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Known secondary structure (DSSP) GGG


TT
TT





SST




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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