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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3odwB_

Fold library idPDB HeaderMoleculeTitle
c3odwB_PDB header: signaling proteinChain: B: PDB Molecule: rho guanine nucleotide exchange factor 1;PDBTitle: crystal structure of the linker-dh/ph domains of p115-rhogef


Added to library: Sat Jan 8 11:06:29 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PKSQVKRQEVISELLVTEAAHVRMLRVLHDLFFQPMAECLFFPLEELQNIFPSLDELIEVHSLFLDRLMK
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Known secondary structure (DSSP)
TTSS
STT
 .........80.........90.........100.........110.........120.........130.........140
Sequence RRQESIEEIGDVLLARFDGAEGSWFQKISSRFCSRQSFALEQLKAKQRKDPRFCAFVQEAESRPRCRRLQ
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Known secondary structure (DSSP) T




ST
TSGGGTT

 .........150.........160.........170.........180.........190.........200.........210
Sequence LKDMIPTEMQRLTKYPLLLQSIGQNTEEPTEREKVELAAECCREILHHVNQAVRDMEDLLRLKDYQRRLD
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Known secondary structure (DSSP) TTTT

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence LSHLRQSLSEFKNLDITKKKLVHEGPLTWRVTKVHVLLLDDLLLLLQRQDERLLLKSLRPVLRLTSAMTR
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Known secondary structure (DSSP)
TTTTT

TTSSS


SSS





SSTT




SGGG

 .........290.........300.........310.........320......
Sequence EVATDHKAFYVLFTEAQIYELVAQTVSERKNWCALITETAGSLKVP
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Known secondary structure (DSSP)
TT
TT





SSTS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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