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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3oc5A_

Fold library idPDB HeaderMoleculeTitle
c3oc5A_PDB header: cell adhesionChain: A: PDB Molecule: toxin coregulated pilus biosynthesis protein f;PDBTitle: crystal structure of the vibrio cholerae secreted colonization factor2 tcpf


Added to library: Sat Apr 23 08:51:40 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EHLRYPYLECIKIGMSRDYLENCVKVSFPTSQDMFYDAYPSTKTRTKEDFSARLLAGDYDSLQKLYIDFY
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Known secondary structure (DSSP)

TTTTTT

GGGGGGGGTB


TTSSGGGGGS




S
TT
TGGGT
 .........80.........90.........100.........110.........120.........130.........140
Sequence LAQTTFDWEIPTRDQIETLVNYANEGKLSTALNQEYITGRFLTKENGRYDIVNVGGVPDNTPVKLPAIVS
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Known secondary structure (DSSP)

TT
S



TT
S
TSSTTSS

TTS




 .........150.........160.........170.........180.........190.........200.........210
Sequence KRGLMGTTSVVNAIPNEIYPHIKVYEGTLSRLKPGGAMIAVLEYDVNELSKHGYTNLWDVQFKVLVGVPH
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Known secondary structure (DSSP) TTTS



S
SS

B







TTS
B

TTS

TTT


TTS



 .........220.........230.........240.........250.........260.........270.........280
Sequence AETGVIYDPVYEETVKPYQPLTGKKLYNVSTNDMHNGYKWSNTMFSNSNYKTQILLTKGDGSGVKLYSKA
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Known secondary structure (DSSP) TTT


SS
S






S


SSS
STTTT
TT

TTS
SS



 ......
Sequence YSENFK
Predicted secondary structure

SS confidence





Known secondary structure (DSSP) B
GGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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