PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3o66A_

Fold library id	PDB Header	Molecule	Title
c3o66A_	PDB header: transport protein	Chain: A: PDB Molecule: glycine betaine/carnitine/choline abc transporter;	PDBTitle: crystal structure of glycine betaine/carnitine/choline abc transporter

Links to external resources
Added to library: Sun Aug 29 01:43:29 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence T K N D V K I T A L S T S E S Q I I S H X L R L L I E H D T H G K I K P T L V N N L G S S T I Q H N A L I N G D A N I S G V R Y N G T D L T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T T T S
S S T S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G A L K E A P I K D P K K A X I A T Q Q G F K K K F D Q T F F D S Y G F A N T Y A F X V T K E T A K K Y H L E T V S D L A K H S K D L R L G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
S S
S
B
T
S B S G G G T T T G G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence X D S S W X N G D G Y E G F K K E Y G F D F G T V R P X Q I G L V Y D A L N T E K L D V A L G Y S T D G R I A A Y D L K V L K D D K Q F F P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G
S
S
G G G T T S
S T T
T T
B
T T
S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . .

Sequence P Y A A S A V A T N E L L R Q H P E L K T T I N K L T G K I S T S E X Q R L N Y E A D G K G K E P A V V A E E F L K K H H Y F D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
T T T T T
T S
T G G G

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	K	N	D	V	K	I	T	A	L	S	T	S	E	S	Q	I	I	S	H	X	L	R	L	L	I	E	H	D	T	H	G	K	I	K	P	T	L	V	N	N	L	G	S	S	T	I	Q	H	N	A	L	I	N	G	D	A	N	I	S	G	V	R	Y	N	G	T	D	L	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	S																		T	T	T	S										S	S											T	S		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	A	L	K	E	A	P	I	K	D	P	K	K	A	X	I	A	T	Q	Q	G	F	K	K	K	F	D	Q	T	F	F	D	S	Y	G	F	A	N	T	Y	A	F	X	V	T	K	E	T	A	K	K	Y	H	L	E	T	V	S	D	L	A	K	H	S	K	D	L	R	L	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T							S																	S								S		B																T		S	B	S	G	G	G	T	T	T	G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	X	D	S	S	W	X	N	G	D	G	Y	E	G	F	K	K	E	Y	G	F	D	F	G	T	V	R	P	X	Q	I	G	L	V	Y	D	A	L	N	T	E	K	L	D	V	A	L	G	Y	S	T	D	G	R	I	A	A	Y	D	L	K	V	L	K	D	D	K	Q	F	F	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G					S													S							G	G	G							T	T	S		S						T	T							T	T					B		T	T			S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Sequence	P	Y	A	A	S	A	V	A	T	N	E	L	L	R	Q	H	P	E	L	K	T	T	I	N	K	L	T	G	K	I	S	T	S	E	X	Q	R	L	N	Y	E	A	D	G	K	G	K	E	P	A	V	V	A	E	E	F	L	K	K	H	H	Y	F	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B														T								T	T	T	T																T	S															T	G	G	G