PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3nqoB_

Fold library id	PDB Header	Molecule	Title
c3nqoB_	PDB header: transcription	Chain: B: PDB Molecule: marr-family transcriptional regulator;	PDBTitle: crystal structure of a marr family transcriptional regulator (cd1569)2 from clostridium difficile 630 at 2.20 a resolution

Links to external resources
Added to library: Sat Aug 28 17:47:51 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence Y S N E L K E L F L X N Q T Y A T L F T L T N K I Q I E G D K Y F G I L T S R Q Y X T I L S I L H L P E E E T T L N N I A R K X G T S K Q N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T S
G G G
T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence I N R L V A N L E K N G Y V D V I P S P H D K R A I N V K V T D L G K K V X V T C S R T G I N F X A D V F H E F T K D E L E T L W S L L K K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
S S
T T
T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . .

Sequence X Y R F N G E E Q D G F E E I D K I K S E A L E E F A K R R N R V N K N D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T S
T T T S
T
S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Y	S	N	E	L	K	E	L	F	L	X	N	Q	T	Y	A	T	L	F	T	L	T	N	K	I	Q	I	E	G	D	K	Y	F	G	I	L	T	S	R	Q	Y	X	T	I	L	S	I	L	H	L	P	E	E	E	T	T	L	N	N	I	A	R	K	X	G	T	S	K	Q	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																			S	S													T	S		G	G	G											T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	N	R	L	V	A	N	L	E	K	N	G	Y	V	D	V	I	P	S	P	H	D	K	R	A	I	N	V	K	V	T	D	L	G	K	K	V	X	V	T	C	S	R	T	G	I	N	F	X	A	D	V	F	H	E	F	T	K	D	E	L	E	T	L	W	S	L	L	K	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T	S							S	S		T	T																													T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Sequence	X	Y	R	F	N	G	E	E	Q	D	G	F	E	E	I	D	K	I	K	S	E	A	L	E	E	F	A	K	R	R	N	R	V	N	K	N	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T	S									T	T	T	S														T		S