PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3npkB_

Fold library id	PDB Header	Molecule	Title
c3npkB_	PDB header: transferase	Chain: B: PDB Molecule: geranyltranstransferase;	PDBTitle: the crystal structure of geranyltranstransferase from campylobacter2 jejuni

Links to external resources
Added to library: Sat Aug 28 17:17:44 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S L N L K E L F I H H L E K N L P K V E S F H P F F N E A L A L X L K A G G K H F R A Q L L L S V V Q S N K P E L L N Q A L D V A L A L E F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
S S
S S
G G G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence I H T Y S L I H D D L P A X D N A D F R R G I P T L H K S Y D E T T A I L V G D A L N T E A F L V L S H A H L K D E I K I K L I K T L A F N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S T T T T
S T T
S
T S S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A G L N G X V I G Q A I D C F F E D K R L S L N E L E F L H T H K T A R L I A A A L K X G C E I C E L N N E E S N Q I Y K L G L K L G L I F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T T G G G S
T T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 .

Sequence Q I N D D I I D N S F V N L L G L E Q A I K T K E N L L N E C E Q D L E K L N E K L A Q X I Q N L I I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	L	N	L	K	E	L	F	I	H	H	L	E	K	N	L	P	K	V	E	S	F	H	P	F	F	N	E	A	L	A	L	X	L	K	A	G	G	K	H	F	R	A	Q	L	L	L	S	V	V	Q	S	N	K	P	E	L	L	N	Q	A	L	D	V	A	L	A	L	E	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T						S	S		S	S																														G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	H	T	Y	S	L	I	H	D	D	L	P	A	X	D	N	A	D	F	R	R	G	I	P	T	L	H	K	S	Y	D	E	T	T	A	I	L	V	G	D	A	L	N	T	E	A	F	L	V	L	S	H	A	H	L	K	D	E	I	K	I	K	L	I	K	T	L	A	F	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	S	T	T	T	T			S			T	T								S																						T	S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	G	L	N	G	X	V	I	G	Q	A	I	D	C	F	F	E	D	K	R	L	S	L	N	E	L	E	F	L	H	T	H	K	T	A	R	L	I	A	A	A	L	K	X	G	C	E	I	C	E	L	N	N	E	E	S	N	Q	I	Y	K	L	G	L	K	L	G	L	I	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	T	T	T											G	G	G	S															T															T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Sequence	Q	I	N	D	D	I	I	D	N	S	F	V	N	L	L	G	L	E	Q	A	I	K	T	K	E	N	L	L	N	E	C	E	Q	D	L	E	K	L	N	E	K	L	A	Q	X	I	Q	N	L	I	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																				T	T	S