Fold library entry viewer: c3nowA_

Added to library: Sat Mar 19 08:47:47 2011
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	N	A	K	T	S	T	K	V	K	Q	M	M	D	L	T	F	D	L	A	T	P	I	D	K	R	R	A	A	A	N	N	L	V	V	L	A	K	E	Q	T	G	A	E	L	L	Y	K	D	H	C	I	A	K	V	A	S	L	T	K	V	E	K	D	Q	D	I	Y	V	N	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	S	S			S	S														S	S											T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	H	L	V	A	A	L	C	E	N	S	V	E	R	T	K	G	V	L	T	E	L	G	V	P	W	F	M	R	V	L	D	Q	K	H	E	N	C	V	S	T	A	Q	F	C	L	Q	T	I	L	N	A	L	S	G	L	K	N	K	P	D	S	K	P	D	K	E	L	C	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T												S													S	T	T																		T			S	S	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	N	N	R	E	I	D	T	L	L	T	C	L	V	Y	S	I	T	D	R	T	I	S	G	A	A	R	D	G	V	I	E	L	I	T	R	N	V	H	Y	T	A	L	E	W	A	E	R	L	V	E	I	R	G	L	C	R	L	L	D	V	C	S	E	L	E	D	Y	K	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T																T		T	T	S																T	T		T	T	T	T								T	T										T			S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	E	S	A	M	D	I	T	G	S	S	S	T	I	A	S	V	C	L	A	R	I	Y	E	N	M	Y	Y	D	E	A	K	A	R	F	T	D	Q	I	D	E	Y	I	K	D	K	L	L	A	P	D	M	E	S	K	V	R	V	T	V	A	I	T	A	L	L	N	G	P	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S						T	T															T			S																				S	S																		S	S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	V	G	N	Q	V	V	A	R	E	G	I	L	Q	M	I	L	A	M	A	T	T	D	D	E	L	Q	Q	R	V	A	C	E	C	L	I	A	A	S	S	K	K	D	K	A	K	A	L	C	E	Q	G	V	D	I	L	K	R	L	Y	H	S	K	N	D	G	I	R	V	R	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	T											S	S																T	T	S						T	T												T	T		S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	L	V	G	L	C	K	L	G	S	Y	G	G	Q	D	A	A	I	R	P	F	G	D	G	A	A	L	K	L	A	E	A	C	R	R	F	L	I	K	P	G	K	D	K	D	I	R	R	W	A	A	D	G	L	A	Y	L	T	L	D	A	E	C	K	E	K	L	I	E	D	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	T	T	T	T	T	S			S	S	T	T	T																S	S			S	S													T	T	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	A	S	I	H	A	L	M	D	L	A	R	G	G	N	Q	S	C	L	Y	G	V	V	T	T	F	V	N	L	C	N	A	Y	E	K	Q	E	M	L	P	E	M	I	E	L	A	K	F	A	K	Q	H	I	P	E	E	H	E	L	D	D	V	D	F	I	N	K	R	I	T	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T		G	G	G												T	T		S								S		G	G	G	T	T	T	T			S				S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	L	A	N	E	G	I	T	T	A	L	C	A	L	A	K	T	E	S	H	N	S	Q	E	L	I	A	R	V	L	N	A	V	C	G	L	K	E	L	R	G	K	V	V	Q	E	G	G	V	K	A	L	L	R	M	A	L	E	G	T	E	K	G	K	R	H	A	T	Q	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T										T																			T	S										T	T											S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	A	R	I	G	I	T	I	N	P	E	V	S	F	S	G	Q	R	S	L	D	V	I	R	P	L	L	N	L	L	Q	Q	D	C	T	A	L	E	N	F	E	S	L	M	A	L	T	N	L	A	S	M	N	E	S	V	R	Q	R	I	I	K	E	Q	G	V	S	K	I	E	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S						T	T	T						T							T	T	S	T	T	S																T	T	S											T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	Y	L	M	E	D	H	L	Y	L	T	R	A	A	A	Q	C	L	C	N	L	V	M	S	E	D	V	I	K	M	F	E	G	N	N	D	R	V	K	F	L	A	L	L	C	E	D	E	D	E	E	T	A	T	A	C	A	G	A	L	A	I	I	T	S	V	S	V	K	C	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S			T	T													T	T	S									S	S	S	S								G	G	G		S	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	E	K	I	L	A	I	A	S	W	L	D	I	L	H	T	L	I	A	N	P	S	P	A	V	Q	H	R	G	I	V	I	I	L	N	M	I	N	A	G	E	E	I	A	K	K	L	F	E	T	D	I	M	E	L	L	S	G	L	G	Q	L	P	D	D	T	R	A	K	A	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	S	T	T										T		S	S																T	T										T	S	T						T	T	S				T	T	S	T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.
Sequence	E	V	A	T	Q	C	L	A	A	A	E	R	Y	R	I	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T

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PDB structure

FASTA sequence

Hidden Markov model

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