PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3nm5B_

Fold library id	PDB Header	Molecule	Title
c3nm5B_	PDB header: hydrolase	Chain: B: PDB Molecule: mta/sah nucleosidase;	PDBTitle: helicobacter pylori mtan complexed with formycin a

Links to external resources
Added to library: Sat Dec 11 13:46:50 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence Q K I G I L G A M R E E I T P I L E L F G V D F E E I P L G G N V F H K G V Y H N K E I I V A Y S K I G K V H S T L T T T S M I L A F G V Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S
T T T T
S S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence K V L F S G V A G S L V K D L K I N D L L V A T Q L V Q H D V D L S A F D H P L G F I P E S A I F I E T S G S L N A L A K K I A N E Q H I A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T S
T T
T T
G G G T
T T
T T S
S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence L K E G V I A S G D Q F V H S K E R K E F L V S E F K A S A V E M E G A S V A F V C Q K F G V P C C V L R S I S D N A D E K A G M S F D E F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S T
S S T T

. . . . . . . . . 220 . . . . . . . . .

Sequence L E K S A H T S A K F L K S M V D E L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Q	K	I	G	I	L	G	A	M	R	E	E	I	T	P	I	L	E	L	F	G	V	D	F	E	E	I	P	L	G	G	N	V	F	H	K	G	V	Y	H	N	K	E	I	I	V	A	Y	S	K	I	G	K	V	H	S	T	L	T	T	T	S	M	I	L	A	F	G	V	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S													S								T	T									T	T										S	S																		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	V	L	F	S	G	V	A	G	S	L	V	K	D	L	K	I	N	D	L	L	V	A	T	Q	L	V	Q	H	D	V	D	L	S	A	F	D	H	P	L	G	F	I	P	E	S	A	I	F	I	E	T	S	G	S	L	N	A	L	A	K	K	I	A	N	E	Q	H	I	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S	T	T	S		T	T											T	T				G	G	G	T			T	T			T	T	S		S																			T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	K	E	G	V	I	A	S	G	D	Q	F	V	H	S	K	E	R	K	E	F	L	V	S	E	F	K	A	S	A	V	E	M	E	G	A	S	V	A	F	V	C	Q	K	F	G	V	P	C	C	V	L	R	S	I	S	D	N	A	D	E	K	A	G	M	S	F	D	E	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	S																						S	S												T													S	S	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Sequence	L	E	K	S	A	H	T	S	A	K	F	L	K	S	M	V	D	E	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)