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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3njqB_

Fold library idPDB HeaderMoleculeTitle
c3njqB_PDB header: viral protein/inhibitorChain: B: PDB Molecule: orf 17;PDBTitle: crystal structure of kaposi's sarcoma-associated herpesvirus protease2 in complex with dimer disruptor


Added to library: Sat Aug 20 09:49:33 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GLYVGGFVDVVSPKLEQELYLDPDQVTDYLPVTEPLPITIEHLPETEVGWTLGLFQVSHGIFCTGAITSP
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Known secondary structure (DSSP)




SSS


GGGTGGG

B
S

TTBTTB

TT

 .........80.........90.........100.........110.........120.........130.........140
Sequence AFLELASRLADTSHVARAPVKNLPKEPLLEILHTWLPGLSLSSIHPREPSGPVFQHVSLCALGRRRGTVA
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Known secondary structure (DSSP)
TT
TT

SS
S


TT


S
SSSS
SSS


 .........150.........160.........170.........180.......
Sequence VYGHDAEWVVSRFSSVSKSERAHILQHVSSRLEDLSTPNFVSPLETL
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Known secondary structure (DSSP) SST
SSS


GGGS



B

GGGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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