PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3n5iC_

Fold library id	PDB Header	Molecule	Title
c3n5iC_	PDB header: hydrolase	Chain: C: PDB Molecule: beta-peptidyl aminopeptidase;	PDBTitle: crystal structure of the precursor (s250a mutant) of the n-terminal2 beta-aminopeptidase bapa

Links to external resources
Added to library: Sat Jun 11 11:47:34 2011

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G P R A R D L G V P F E G T P G A L N A I T D V A G V E V G H T T V I S G D G A M V I G K G P Y R T G V T I I H P L G K T S L D G V A A G R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G G T
S B
S S S S G G G S T T
B S
B T T T B
T T
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A V I N G T G E W T G M H L V D E V G Q F L G P I A L T G T G N V G L V H Q S M M D W S V G K V P E E A L F S R L L P V V A E T L D N R L N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
B T T S S
G G G B T T B
G G G G G G G S S
T T T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence D V F G H G L T R D H V F A A L D G A K G G P V A E G N V G G G T G M I A Y T F K G G I G T S S R V V S A G D T R Y T V G V L V Q A N H G D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
B S S S
B S
G G G T T
T T
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence R N D L R I A G V Q I G K E I K G A W P E V N G I V A A K N A L L I V I A T D A P L M P H Q L E R M A R R A A L G V G R N G S T A G A L S G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
T T
T T T S
S
T T
S
T T
T T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence E F A L A F S T S H V I P L G G K P R L P A I I N D T D S E T M N A L F R G V V Q A T E E A L V N Q L V A S E T M T G A N N A K V Y G I P H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
B
S S
T T
B T T

. . . . . . . . . 360 . .

Sequence D Q L A R I M K A R F P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	P	R	A	R	D	L	G	V	P	F	E	G	T	P	G	A	L	N	A	I	T	D	V	A	G	V	E	V	G	H	T	T	V	I	S	G	D	G	A	M	V	I	G	K	G	P	Y	R	T	G	V	T	I	I	H	P	L	G	K	T	S	L	D	G	V	A	A	G	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				G	G	G	G	T					S	B			S	S	S	S	G	G	G	S	T	T													B	S		B	T	T	T	B											T	T		T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	V	I	N	G	T	G	E	W	T	G	M	H	L	V	D	E	V	G	Q	F	L	G	P	I	A	L	T	G	T	G	N	V	G	L	V	H	Q	S	M	M	D	W	S	V	G	K	V	P	E	E	A	L	F	S	R	L	L	P	V	V	A	E	T	L	D	N	R	L	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S		B	T	T								S				S							G	G	G													B	T	T	B		G	G	G	G	G	G	G	S	S									T	T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	D	V	F	G	H	G	L	T	R	D	H	V	F	A	A	L	D	G	A	K	G	G	P	V	A	E	G	N	V	G	G	G	T	G	M	I	A	Y	T	F	K	G	G	I	G	T	S	S	R	V	V	S	A	G	D	T	R	Y	T	V	G	V	L	V	Q	A	N	H	G	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S																B	S	S	S				B	S		G	G	G	T	T				T	T															T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	R	N	D	L	R	I	A	G	V	Q	I	G	K	E	I	K	G	A	W	P	E	V	N	G	I	V	A	A	K	N	A	L	L	I	V	I	A	T	D	A	P	L	M	P	H	Q	L	E	R	M	A	R	R	A	A	L	G	V	G	R	N	G	S	T	A	G	A	L	S	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T				T	T				T	T	T	S		S						T	T																S																					T	T					T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	E	F	A	L	A	F	S	T	S	H	V	I	P	L	G	G	K	P	R	L	P	A	I	I	N	D	T	D	S	E	T	M	N	A	L	F	R	G	V	V	Q	A	T	E	E	A	L	V	N	Q	L	V	A	S	E	T	M	T	G	A	N	N	A	K	V	Y	G	I	P	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T	S			B		S	S				T	T																																	B	T	T
	.	.	.	.	.	.	.	.	.	360	.	.
Sequence	D	Q	L	A	R	I	M	K	A	R	F	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)