PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3n0xA_

Fold library id	PDB Header	Molecule	Title
c3n0xA_	PDB header: transport protein	Chain: A: PDB Molecule: possible substrate binding protein of abc transporter	PDBTitle: crystal structure of an abc-type branched-chain amino acid transporter2 (rpa4397) from rhodopseudomonas palustris cga009 at 1.50 a resolution

Links to external resources
Added to library: Sat Aug 28 16:05:40 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence D L K I A L I Y G K T G P L E A Y A K Q T E T G L X X G L E Y A T K G T X T L D G R K I V V I T K D D Q S K P D L S K A A L A E A Y Q D D G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T T T T T
T T
T T
T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A D I A I G T S S S A A A L A D L P V A E E N K K I L I V E P A V A D Q I T G E K W N R Y I F R T G R N S S Q D A I S N A V A I G K Q G V T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S T
S
G G G G T T T
T T
S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence I A T L A Q D Y A F G R D G V A A F K E A L A K T G A T L A T E E Y V P T T T T D F T A V G Q R L F D A L K D K P G K K I I W V I W A G G G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S T T T T
T T
T T
S S
S S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence D P L T K L Q D X D P K R Y G I E L S T G G N I L P A L A A Y K R L P G X E G A T Y Y Y Y D I P K N P I N E W L V T E H Q K R F N A P P D F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
G G G G T
T T G G G G G G G S T T
S
T T S
S S S

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence F T A G G F S A A X A V V T A V Q K A K S T D T E K L I A A X E G X E F D T P K G K X V F R K E D H Q A L Q S X Y H F K V K V D P A V A W A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
T T
T T
T T T
B
T T S S S

. . . . . . . . . 360 . . . . . . . . . 370 .

Sequence V L E P V R E L K I E E X N I P I K N K K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G

Download: PDB structure FASTA sequence
Hidden Markov model

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	L	K	I	A	L	I	Y	G	K	T	G	P	L	E	A	Y	A	K	Q	T	E	T	G	L	X	X	G	L	E	Y	A	T	K	G	T	X	T	L	D	G	R	K	I	V	V	I	T	K	D	D	Q	S	K	P	D	L	S	K	A	A	L	A	E	A	Y	Q	D	D	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	S	T	T																			T	T	T					T	T											T	T															T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	D	I	A	I	G	T	S	S	S	A	A	A	L	A	D	L	P	V	A	E	E	N	K	K	I	L	I	V	E	P	A	V	A	D	Q	I	T	G	E	K	W	N	R	Y	I	F	R	T	G	R	N	S	S	Q	D	A	I	S	N	A	V	A	I	G	K	Q	G	V	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S						S	S															T							S				G	G	G	G	T	T	T			T	T					S																	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	A	T	L	A	Q	D	Y	A	F	G	R	D	G	V	A	A	F	K	E	A	L	A	K	T	G	A	T	L	A	T	E	E	Y	V	P	T	T	T	T	D	F	T	A	V	G	Q	R	L	F	D	A	L	K	D	K	P	G	K	K	I	I	W	V	I	W	A	G	G	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S															T	T	T	T											T	T																T	T		S	S										S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	D	P	L	T	K	L	Q	D	X	D	P	K	R	Y	G	I	E	L	S	T	G	G	N	I	L	P	A	L	A	A	Y	K	R	L	P	G	X	E	G	A	T	Y	Y	Y	Y	D	I	P	K	N	P	I	N	E	W	L	V	T	E	H	Q	K	R	F	N	A	P	P	D	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T		G	G	G	G	T										T	T	G	G	G	G	G	G	G	S	T	T						S			T	T	S			S															S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	F	T	A	G	G	F	S	A	A	X	A	V	V	T	A	V	Q	K	A	K	S	T	D	T	E	K	L	I	A	A	X	E	G	X	E	F	D	T	P	K	G	K	X	V	F	R	K	E	D	H	Q	A	L	Q	S	X	Y	H	F	K	V	K	V	D	P	A	V	A	W	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				T	S											T	T						T	T							T	T	T		B														T	T	S	S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Sequence	V	L	E	P	V	R	E	L	K	I	E	E	X	N	I	P	I	K	N	K	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										G	G	G