PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3mqzA_

Fold library id	PDB Header	Molecule	Title
c3mqzA_	PDB header: structural genomics, unknown function	Chain: A: PDB Molecule: uncharacterized conserved protein duf1054;	PDBTitle: crystal structure of conserved protein duf1054 from pink subaerial2 biofilm microbial leptospirillum sp. group ii uba.

Links to external resources
Added to library: Sat Aug 28 16:03:31 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence I E R L Q D Y L L P E W V S I F D I A D F S G R X L R I R G D I R P A L L R L A S R L A E L L N E S P G P R P W Y P H V A S H X R R R V N P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B G G G T S
G G G G G G G G
S T T S
S S
S
S S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence P P E T W L A L G P E K R G Y K S Y A H S G V F I G G R G L S V R F I L K D E A I E E R K N L G R W X S R S G P A F E Q W K K K V G D L R D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S S S
T T S
T T
T T
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . .

Sequence F G P V H D D P X A D P P K V E W D P R V F G E R L G S L K S A S L D I G F R V T F D T S L A G I V K T I R T F D L L Y A E A E K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G T T
T T S
B
S
T T
T T
B T T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	I	E	R	L	Q	D	Y	L	L	P	E	W	V	S	I	F	D	I	A	D	F	S	G	R	X	L	R	I	R	G	D	I	R	P	A	L	L	R	L	A	S	R	L	A	E	L	L	N	E	S	P	G	P	R	P	W	Y	P	H	V	A	S	H	X	R	R	R	V	N	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B	G	G	G	T	S		G	G	G	G	G	G	G	G			S											T																		T	S			S	S											S		S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	P	E	T	W	L	A	L	G	P	E	K	R	G	Y	K	S	Y	A	H	S	G	V	F	I	G	G	R	G	L	S	V	R	F	I	L	K	D	E	A	I	E	E	R	K	N	L	G	R	W	X	S	R	S	G	P	A	F	E	Q	W	K	K	K	V	G	D	L	R	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S								S	S	S	S			T	T	S									T	T										T	T																												S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Sequence	F	G	P	V	H	D	D	P	X	A	D	P	P	K	V	E	W	D	P	R	V	F	G	E	R	L	G	S	L	K	S	A	S	L	D	I	G	F	R	V	T	F	D	T	S	L	A	G	I	V	K	T	I	R	T	F	D	L	L	Y	A	E	A	E	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G	T	T		T	T	S				B			S													T	T											T	T		B											T							T	T