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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3mguA_

Fold library idPDB HeaderMoleculeTitle
c3mguA_PDB header: oxidoreductaseChain: A: PDB Molecule: pkhd-type hydroxylase tpa1;PDBTitle: saccharomyces cerevisiae tpa1


Added to library: Thu Jan 10 01:16:10 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence IKGMFNPKIWDKTFQDGLKKEIEDSQPYNWGTIHELVNDDLLRAVRKEIETEIHFTKKETDIYRVNQSPN
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Known secondary structure (DSSP)



B
GGGGS
SSSS
TT
B





SS


T
 .........80.........90.........100.........110.........120.........130.........140
Sequence LFKLRQILYSKQYRDFFGYVTKAGKLSGSKTDMSINTYTKGCHLLTHDDVIGSRRISFILYLPDPDRKWK
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Known secondary structure (DSSP) SSTT



BSSS

TT




TT

TTS


 .........150.........160.........170.........180.........190.........200.........210
Sequence SHYGGGLRLFPSILPNVPHSDPSAKLVPQFNQIAFFKVLPGFSFHDVEEVKVDKHRLSIQGWYHIPQVGE
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Known secondary structure (DSSP) GGGB


BSSTT
B
SS
S


TT


TTT


B
SS



TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence EGYIPGEEEAWVRNNTSNVLEDFEFPKDERNILSFHEVKHFEKMLKSEAEFTYLSQYISPEHLSSKGIEK
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Known secondary structure (DSSP) TT

TTTTTT


GGGGGG
BS





T

TTTB
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence LQKQFVENSSLQIESFLNDDKSELLKKVIKQKELEQECPYHSKDVKAPWKTAIPPHKARYLYIDGKEYRN
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Known secondary structure (DSSP) SSS
B
S



SGGG

TT

B
TTT

SS



 .........360.........370.........380.........390.........400.........410.........420
Sequence FQTEADILEALNNNDLPNFQFTKDAIKIISSRENNFDAELALIDLAVFHKSTIFKKYLALLTSLCPVSEQ
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Known secondary structure (DSSP)

SS








TTTST
 .........430.........440.........450.........460.........470.........480.........490
Sequence ILIRRFRPGMDFTLATKCRFNELLKSNPDIIDAVLEGTLCLTPSAGWESGELGGYELYMMDDGDSVLIND
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Known secondary structure (DSSP)
TTT


B




TTTSS
SS


S


SSTT







 .........500.........510.........520.........530...
Sequence PPAWNTFNLVLRDESVLEFVKYVSWSAKSSRWDVKMKWDVKSC
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Known secondary structure (DSSP)



TT



TT
SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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