PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3mdpA_

Fold library id	PDB Header	Molecule	Title
c3mdpA_	PDB header: nucleotide binding protein	Chain: A: PDB Molecule: cyclic nucleotide-binding domain (cnmp-bd) protein;	PDBTitle: crystal structure of a putative cyclic nucleotide-binding protein2 (gmet_1532) from geobacter metallireducens gs-15 at 1.90 a resolution

Links to external resources
Added to library: Sat Aug 28 16:31:50 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence X I S P E R L R V Y R F F A S L T D E Q L K D I A L I S E E K S F P T G S V I F K E N S K A D N L X L L L E G G V E L F Y S S T V C S V V P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T G G G G S T S
T
T T
T T S B
S
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . .

Sequence G A I F G V S S L I K P Y H Y T S S A R A T K P V R V V D I N G A R L R E X S E N N Q A L G Q V L X N N V A A A V L A R L H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
G G G S S T T
B
S S S S
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	X	I	S	P	E	R	L	R	V	Y	R	F	F	A	S	L	T	D	E	Q	L	K	D	I	A	L	I	S	E	E	K	S	F	P	T	G	S	V	I	F	K	E	N	S	K	A	D	N	L	X	L	L	L	E	G	G	V	E	L	F	Y	S	S	T	V	C	S	V	V	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	G	G	G	G	S					T	S											T								T	T						T	T	S	B										S															T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Sequence	G	A	I	F	G	V	S	S	L	I	K	P	Y	H	Y	T	S	S	A	R	A	T	K	P	V	R	V	V	D	I	N	G	A	R	L	R	E	X	S	E	N	N	Q	A	L	G	Q	V	L	X	N	N	V	A	A	A	V	L	A	R	L	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T					G	G	G	S	S	T	T		B		S	S					S	S																																					T	T