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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3mawB_

Fold library idPDB HeaderMoleculeTitle
c3mawB_PDB header: viral proteinChain: B: PDB Molecule: fusion glycoprotein f0;PDBTitle: structure of the newcastle disease virus f protein in the post-fusion2 conformation


Added to library: Wed Jan 9 19:02:57 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GRPLAAAGIVVTGDKAVNIYTSSQTGSIIVKLLPNMPKDKEACAKAPLEAYNRTLTTLLTPLGDSIRRIN
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Known secondary structure (DSSP)

GGGGTT



SS



TT

TTST

 .........80.........90.........100.........110.........120.........130.........140
Sequence QNAANILRLKESITATNEAVHEVTDGLSQLAVAVGKMQQFVNDQFNNTAQELDCIKITQQVGVELNLYLT
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Known secondary structure (DSSP)
TTTTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence ELTTVFGPQITSPALTQLTIQALYNLAGGNMDYLLTKLGVGNNQLSSLIGSGLITGNPILYDSQTQLLGI
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Known secondary structure (DSSP) S
SS


TTT
T

GGGTTT
STTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence QVTLPSVGNLNNMRATYLETLSVSTTKGFASALVPKVVTQVGSVIEELDTSYCIETDLDLYCTRIVTFPM
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Known secondary structure (DSSP)





SSSS


STT
TTS
SSS




 .........290.........300.........310.........320.........330.........340.........350
Sequence SPGIYSCLNGNTSACMYSKTEGALTTPYMTLKGSVIANCKMTTCRCADPPGIISQNYGEAVSLIDRHSCN
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Known secondary structure (DSSP)
T
GGG





SS

STT
TTTS
SSS
S


TT
SS
TTT
S
 .........360.........370.........380.........390.........400.........410........
Sequence VLSLDGITLRLSGEFDATYQKNISILDSQVIVTGNLDISTELGNVNNSISNALDKLEESNSKLDKVNV
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Known secondary structure (DSSP) B
SS


B



























SSTT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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