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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3m9uD_

Fold library idPDB HeaderMoleculeTitle
c3m9uD_PDB header: transferaseChain: D: PDB Molecule: farnesyl-diphosphate synthase;PDBTitle: crystal structure of geranylgeranyl pyrophosphate synthase2 from lactobacillus brevis atcc 367


Added to library: Sat Aug 28 20:57:41 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SLINARLIAFEDQWVPALNAPLKQAILADSQDAQLAAAMTYSVLAGGKRLRPLLTVATMQSLGVTFVPER
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Known secondary structure (DSSP)



TTT
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 .........80.........90.........100.........110.........120.........130.........140
Sequence HWRPVMALELLHTYSLIHDDLPAMDNDALRRGEPTNHVKFGAGMATLAGDGLLTLAFQWLTATDLPATMQ
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Known secondary structure (DSSP) STTTT

STT

TSSS

 .........150.........160.........170.........180.........190.........200.........210
Sequence AALVQALATAAGPSGMVAGQAKDIQSEHVNLPLSQLRVLHKEKTGALLHYAVQAGLILGQAPEAQWPAYL
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Known secondary structure (DSSP) STTTTTT



TTT

GGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence QFADAFGLAFQIYDDILDVVSSPAEAKNTYPGKLGLIGANQALIDTIHSGQAALQGLPTSTQRDDLAAFF
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Known secondary structure (DSSP)





TTSTTS


GGG
 ........
Sequence SYFDTERV
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Known secondary structure (DSSP) GGS
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Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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