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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3m6zA_

Fold library idPDB HeaderMoleculeTitle
c3m6zA_PDB header: isomeraseChain: A: PDB Molecule: topoisomerase v;PDBTitle: crystal structure of an n-terminal 44 kda fragment of topoisomerase v2 in the presence of guanidium hydrochloride


Added to library: Sat Aug 28 23:39:42 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VYDAEFVGSEREFEEERETFLKGVKAYDGVLATRYLMERSSSAKNDEELLELHQNFILLTGSYACSIDPT
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Known secondary structure (DSSP)

S

T
TSSTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence EDRYQNVIVRGVNFDERVQRLSTGGSPARYAIVYRRGWRAIAKALDIDEEDVPAIEVRAVKRNPLQPALY
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Known secondary structure (DSSP) S
STTSTT


TSTTTT

SSSS







TT
SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence RILVRYGRVDLMPVTVDEVPPEMAGEFERLIERYDVPIDEKEERILEILRENPWTPHDEIARRLGLSVSE
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Known secondary structure (DSSP) TT
TTTS
SSGGG

GGGTTTTT




TT

T

 .........220.........230.........240.........250.........260.........270.........280
Sequence VEGEKDPESSGIYSLWSRVVVNIEYDERTAKRHVKRRDRLLEELYEHLEELSERYLRHPLTRRWIVEHKR
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Known secondary structure (DSSP)

SSTTS
STS


TT
SS


T
 .........290.........300.........310.........320.........330.........340.........350
Sequence DIMRRYLEQRIVECALKLQDRYGIREDVALCLARAFDGSISMIATTPYRTLKDVCPDLTLEEAKSVNRTL
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Known secondary structure (DSSP) S


TTT
TTS

TT


 .........360.........370..
Sequence ATLIDEHGLSPDAADELIEHFE
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Known secondary structure (DSSP) TT




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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