PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3lxmC_

Fold library id	PDB Header	Molecule	Title
c3lxmC_	PDB header: transferase	Chain: C: PDB Molecule: aspartate carbamoyltransferase;	PDBTitle: 2.00 angstrom resolution crystal structure of a catalytic2 subunit of an aspartate carbamoyltransferase (pyrb) from3 yersinia pestis co92

Links to external resources
Added to library: Sun Aug 29 04:40:53 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence N P L Y H K H I I S I N D L S R D E L E L V L R T A A S L K K T P Q P E L L K H K V I A S C F F E A S T R T R L S F E T S I H R L G A S V V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T
B
G G G S
S
T T T T T T
S S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G F S D S G E T L A D T M S V I S T Y V D A I V M R H P Q E G A S R L A A Q F S G N V P I V N A G D G A N P T Q T L L D L F T I Q E T Q G R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S S T T S T T S
T T
T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence L D N I N I A M V G D L K Y G R T V H S L T Q A L A K F N G N H F F F I A P D A L A M P A Y I L Q M L E E K E I E Y S L H E S L E E V V P E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S
S
T T T
T T S S S
G G G
T T
S
S T T T G G G

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . .

Sequence L D I L Y M T I L R S S D L T G A R D N L K V L H P L P R I D E I T T D V D K T P Y A Y Y F Q Q A G N G I F A R Q A L L A L V L N A E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
B
G G G G T T
T T
S
S S S B
T S T T B
T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	N	P	L	Y	H	K	H	I	I	S	I	N	D	L	S	R	D	E	L	E	L	V	L	R	T	A	A	S	L	K	K	T	P	Q	P	E	L	L	K	H	K	V	I	A	S	C	F	F	E	A	S	T	R	T	R	L	S	F	E	T	S	I	H	R	L	G	A	S	V	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T	T			B			G	G	G	S																		S			T	T	T	T	T	T								S	S																T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	F	S	D	S	G	E	T	L	A	D	T	M	S	V	I	S	T	Y	V	D	A	I	V	M	R	H	P	Q	E	G	A	S	R	L	A	A	Q	F	S	G	N	V	P	I	V	N	A	G	D	G	A	N	P	T	Q	T	L	L	D	L	F	T	I	Q	E	T	Q	G	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S																		S							S	S	T	T									S	T	T	S								T	T			T														S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	D	N	I	N	I	A	M	V	G	D	L	K	Y	G	R	T	V	H	S	L	T	Q	A	L	A	K	F	N	G	N	H	F	F	F	I	A	P	D	A	L	A	M	P	A	Y	I	L	Q	M	L	E	E	K	E	I	E	Y	S	L	H	E	S	L	E	E	V	V	P	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S							S		T	T	T												T	T	S	S	S									G	G	G													T	T							S		S	T	T	T	G	G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Sequence	L	D	I	L	Y	M	T	I	L	R	S	S	D	L	T	G	A	R	D	N	L	K	V	L	H	P	L	P	R	I	D	E	I	T	T	D	V	D	K	T	P	Y	A	Y	Y	F	Q	Q	A	G	N	G	I	F	A	R	Q	A	L	L	A	L	V	L	N	A	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S							B		G	G	G	G	T	T			T	T							S			S	S	S	B		T					S	T	T	B								T