PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3lsnA_

Fold library id	PDB Header	Molecule	Title
c3lsnA_	PDB header: transferase	Chain: A: PDB Molecule: geranyltranstransferase;	PDBTitle: crystal structure of putative geranyltranstransferase from2 pseudomonas fluorescens pf-5 complexed with magnesium

Links to external resources
Added to library: Sun Aug 29 00:12:56 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S L T A Y Q A S S Q A R V D A A X H T L F T A P S P E L A R L Y E A X R Y S V X N G G K R V R P L L A Y A A C E A L G G K P E Q A N G A A C

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G
S S G G G T T T
T T
G G G G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A V E L I H A Y S L V H D D L P A X D D D D L R R G Q P T T H K A F D E A C A I L A G D G L Q S L A F S A L L D P A L S D A S A E I R L R X

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S T T T T
S T T
S
T T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V T T L A Q A A G P A G X V G G Q A I D L G S V G L K L D Q Q A L E Y X H R H K T G A L I E A S V I L G A L A S G R A E K G E L K A L Q T Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T T T T T
T T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence A Q A I G L A F Q V Q D D I L D V E S D T A T L P T Y P A L L G L A A A K E Y A L E L R D Q A L H A L R P F D A A A E P L R E L A R Y I V E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T S
G G G

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	L	T	A	Y	Q	A	S	S	Q	A	R	V	D	A	A	X	H	T	L	F	T	A	P	S	P	E	L	A	R	L	Y	E	A	X	R	Y	S	V	X	N	G	G	K	R	V	R	P	L	L	A	Y	A	A	C	E	A	L	G	G	K	P	E	Q	A	N	G	A	A	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			G	G	G			S	S	G	G	G												T	T	T																T	T			G	G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	V	E	L	I	H	A	Y	S	L	V	H	D	D	L	P	A	X	D	D	D	D	L	R	R	G	Q	P	T	T	H	K	A	F	D	E	A	C	A	I	L	A	G	D	G	L	Q	S	L	A	F	S	A	L	L	D	P	A	L	S	D	A	S	A	E	I	R	L	R	X
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	S	T	T	T	T			S			T	T								S																							T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	T	T	L	A	Q	A	A	G	P	A	G	X	V	G	G	Q	A	I	D	L	G	S	V	G	L	K	L	D	Q	Q	A	L	E	Y	X	H	R	H	K	T	G	A	L	I	E	A	S	V	I	L	G	A	L	A	S	G	R	A	E	K	G	E	L	K	A	L	Q	T	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	T	T	T											T	T	T																T															T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	A	Q	A	I	G	L	A	F	Q	V	Q	D	D	I	L	D	V	E	S	D	T	A	T	L	P	T	Y	P	A	L	L	G	L	A	A	A	K	E	Y	A	L	E	L	R	D	Q	A	L	H	A	L	R	P	F	D	A	A	A	E	P	L	R	E	L	A	R	Y	I	V	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																																			T	T	T	S		G	G	G