PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3lqkA_

Fold library id	PDB Header	Molecule	Title
c3lqkA_	PDB header: oxidoreductase	Chain: A: PDB Molecule: dipicolinate synthase subunit b;	PDBTitle: crystal structure of dipicolinate synthase subunit b from2 bacillus halodurans c

Links to external resources
Added to library: Sun Aug 29 01:17:35 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence X N F A G K H V G F G L T G S H C T Y H E V L P Q X E R L V E L G A K V T P F V T H T V Q T T D T K F G E S S E W I N K I K Q I T E E P I V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S
G G G G G G T T T
S S
S
T T
T T
S
S
B

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence D S X V K A E P F G P K T P L D C X V I A P X T G N S T S K F A N A X T D S P V L X G A K A T L R N G K P V V V G I S T N D A L G L N G I N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S G G G T T T S
S
T T
S T T
T T T T T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . .

Sequence I X R L X A T K N I Y F I P F G Q D N P Q V K P N S L V A R X E A L P E T I E A A L R G Q Q Y Q P V L I E K F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S T T
S
T T T
T T
G G G T T
S
B

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	X	N	F	A	G	K	H	V	G	F	G	L	T	G	S	H	C	T	Y	H	E	V	L	P	Q	X	E	R	L	V	E	L	G	A	K	V	T	P	F	V	T	H	T	V	Q	T	T	D	T	K	F	G	E	S	S	E	W	I	N	K	I	K	Q	I	T	E	E	P	I	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T									S		G	G	G	G	G	G	T										T	T								S	S		S			T	T			T	T		S													S			B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	S	X	V	K	A	E	P	F	G	P	K	T	P	L	D	C	X	V	I	A	P	X	T	G	N	S	T	S	K	F	A	N	A	X	T	D	S	P	V	L	X	G	A	K	A	T	L	R	N	G	K	P	V	V	V	G	I	S	T	N	D	A	L	G	L	N	G	I	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S					G	G	G	T	T	T	S			S																	T	T				S												T	T										T	T	T	T	T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Sequence	I	X	R	L	X	A	T	K	N	I	Y	F	I	P	F	G	Q	D	N	P	Q	V	K	P	N	S	L	V	A	R	X	E	A	L	P	E	T	I	E	A	A	L	R	G	Q	Q	Y	Q	P	V	L	I	E	K	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	S	T	T									S		T	T	T		T	T						G	G	G										T	T				S			B